RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 UBE2ZQ9H832 354 aaPredicted RBP3.23□□□□□ -1.89
RPL39-201ENST00000361575 PATZ1Q9HBE1 687 aaKnown RBP3.23□□□□□ -1.89
RPL39-201ENST00000361575 MRM3Q9HC36 420 aaKnown RBP3.23□□□□□ -1.89
RPL39-201ENST00000361575 ZNF331Q9NQX6 463 aaPredicted RBP3.23□□□□□ -1.89
RPL39-201ENST00000361575 ZC4H2Q9NQZ6 224 aa3.23□□□□□ -1.89
RPL39-201ENST00000361575 RBAKQ9NYW8 714 aaPredicted RBP3.23□□□□□ -1.89
RPL39-201ENST00000361575 DDX19BQ9UMR2 479 aa3.23□□□□□ -1.89
RPL39-201ENST00000361575 KPTNQ9Y664 436 aa3.23□□□□□ -1.89
RPL39-201ENST00000361575 COMMD3-BMI1R4GMX3 469 aa3.23□□□□□ -1.89
RPL39-201ENST00000361575 TRAV6A0A075B6T7 132 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 WI2-2373I1.2A0A1W2PRP0 233 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 NKX2-6A6NCS4 301 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 PES1O00541 588 aaKnown RBP3.22□□□□□ -1.89
RPL39-201ENST00000361575 KLK1P06870 262 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 PNMA6AP0CW24 399 aaPredicted RBP3.22□□□□□ -1.89
RPL39-201ENST00000361575 RAB3BP20337 219 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 LONP1P36776 959 aaKnown RBP3.22□□□□□ -1.89
RPL39-201ENST00000361575 ZNF121P58317 390 aaPredicted RBP3.22□□□□□ -1.89
RPL39-201ENST00000361575 MADCAM1Q13477 382 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 CAPRIN1Q14444 709 aaKnown RBP3.22□□□□□ -1.89
RPL39-201ENST00000361575 PRPSAP1Q14558 356 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 HES5Q5TA89 166 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 SLC25A25Q6KCM7 469 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 HORMAD1Q86X24 394 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 FAM71AQ8IYT1 594 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 ITFG1Q8TB96 612 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 TCP10LQ8TDR4 215 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 ZFP90Q8TF47 636 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 MITD1Q8WV92 249 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 BAALCQ8WXS3 180 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 CACNG8Q8WXS5 425 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 SLC40A1Q9NP59 571 aa3.22□□□□□ -1.89
RPL39-201ENST00000361575 ASTN1O14525 1302 aa3.21□□□□□ -1.89
RPL39-201ENST00000361575 IGHV3-74A0A0B4J1X5 117 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 C11orf94C9JXX5 98 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 XRCC2O43543 280 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 GMDSO60547 372 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 NMT2O60551 498 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 MPDU1O75352 247 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 CA11O75493 328 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 HPRT1P00492 218 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 TLX1NBP0CAT3 122 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 PRPS2P11908 318 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 CYB561P49447 251 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 PPP1CBP62140 327 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 IFT88Q13099 833 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 MPPED2Q15777 294 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 ZNF829Q3KNS6 432 aaPredicted RBP3.21□□□□□ -1.9
RPL39-201ENST00000361575 C16orf87Q6PH81 154 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 ARL9Q6T311 187 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 WDR82Q6UXN9 313 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 MRPL55Q7Z7F7 128 aaKnown RBP3.21□□□□□ -1.9
RPL39-201ENST00000361575 CSGALNACT2Q8N6G5 542 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 C15orf56Q8N910 161 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 CHST4Q8NCG5 386 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 TMEM104Q8NE00 496 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 NOXO1Q8NFA2 376 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 OR10W1Q8NGF6 305 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 OR10G4Q8NGN3 311 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 LRRC29Q8WV35 223 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 ZNF681Q96N22 645 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 AGMATQ9BSE5 352 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 SLC25A2Q9BXI2 301 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 CHRNA10Q9GZZ6 450 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 SAV1Q9H4B6 383 aaPredicted RBP3.21□□□□□ -1.9
RPL39-201ENST00000361575 SLC39A1Q9NY26 324 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 ANAPC11Q9NYG5 84 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 UVRAGQ9P2Y5 699 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 UBIAD1Q9Y5Z9 338 aa3.21□□□□□ -1.9
RPL39-201ENST00000361575 PCDH11XQ9BZA7 1347 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 BRCA1P38398 1863 aaKnown RBP3.2□□□□□ -1.9
RPL39-201ENST00000361575 NACAE9PAV3 2078 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 TRBV6-6A0A0A6YYG2 114 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 PINLYPA6NC86 204 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 A8MU10 97 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 SPOPO43791 374 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 RDH16O75452 317 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 CATP04040 527 aaKnown RBP3.2□□□□□ -1.9
RPL39-201ENST00000361575 S100A9P06702 114 aaKnown RBP3.2□□□□□ -1.9
RPL39-201ENST00000361575 CD3GP09693 182 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 PTNP21246 168 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 HOXA9P31269 272 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 RAB7AP51149 207 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 ATP5J2P56134 94 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 ZNF266Q14584 549 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 QPRTQ15274 297 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 C5orf64Q2M2E5 130 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 C2orf83Q53S99 150 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 CYB5R2Q6BCY4 276 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 C12orf56Q8IXR9 622 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 ARIH2OSQ8N7S6 290 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 Q8N976 141 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 TFGQ92734 400 aaPredicted RBP3.2□□□□□ -1.9
RPL39-201ENST00000361575 SGTBQ96EQ0 304 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 ZNF799Q96GE5 643 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 FAM210BQ96KR6 192 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 GAL3ST2Q9H3Q3 398 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 ISYNA1Q9NPH2 558 aa3.2□□□□□ -1.9
RPL39-201ENST00000361575 IGLV11-55A0A075B6I3 123 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms