RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 C19orf53Q9UNZ5 99 aaPredicted RBP18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 LOC107986453A0A1B0GWG9 222 aa18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 SIX6O95475 246 aa18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 ETHE1O95571 254 aa18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 PLPP6Q8IY26 295 aa18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 EVA1AQ9H8M9 152 aa18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 TXNL4BQ9NX01 149 aaKnown RBP18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 SOD1P00441 154 aa18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 NAGAP17050 411 aa18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 RTL8BQ17RB0 113 aa18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 THEM4Q5T1C6 240 aa18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 CISD2Q8N5K1 135 aaKnown RBP18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 OCIAD1Q9NX40 245 aa18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 CHRNB1P11230 501 aa18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 KIRREL1Q96J84 757 aa18.42■□□□□ 0.54
CDC42BPB-201ENST00000361246 SLC31A2O15432 143 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 ALPLP05186 524 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 HLA-DOBP13765 273 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 FPR3P25089 353 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 PRSS12P56730 875 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 OR2V1Q8NHB1 315 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 ASB4Q9Y574 426 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 OPCMLQ14982 345 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 NUDT9Q9BW91 350 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 DOCK1Q14185 1865 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 GPR3P46089 330 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 AGERQ15109 404 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 PRSS41Q7RTY9 318 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 ZDHHC23Q8IYP9 409 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 IL21Q9HBE4 155 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 WNT16Q9UBV4 365 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 ATPIF1Q9UII2 106 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 PRPH2P23942 346 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 ZMAT1Q5H9K5 638 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 CMIPQ8IY22 773 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 LAT2Q9GZY6 243 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 POMT2Q9UKY4 750 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 DOK3Q7L591 496 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 ORAI1Q96D31 301 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 TRIP12Q14669 1992 aaPredicted RBP18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 COX7A1P24310 79 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 CEACAM16Q2WEN9 425 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 ALKAL2Q6UX46 152 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 SPNS1Q9H2V7 528 aa18.41■□□□□ 0.54
CDC42BPB-201ENST00000361246 NFYAP23511 347 aaPredicted RBP18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 STEAP1BQ6NZ63 245 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 CLDN22Q8N7P3 220 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 ARV1Q9H2C2 271 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 NAA40Q86UY6 237 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 C1orf87Q8N0U7 546 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 TEX101Q9BY14 249 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 GLAP06280 429 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 UBE2G2P60604 165 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 CHST2Q9Y4C5 530 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 ONECUT2O95948 504 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 HOXD12P35452 270 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 THBS3P49746 956 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 ZNF121P58317 390 aaPredicted RBP18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 SPANXN5Q5MJ07 72 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 ADGRE4PQ86SQ3 457 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 KMT5CQ86Y97 462 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 NID1P14543 1247 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 ETV1P50549 477 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 CT55Q8WUE5 264 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 TMEM230Q96A57 120 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 PLA2G12AQ9BZM1 189 aa18.4■□□□□ 0.54
CDC42BPB-201ENST00000361246 SCN3AQ9NY46 2000 aa18.39■□□□□ 0.54
CDC42BPB-201ENST00000361246 A0A0B4J203 849 aa18.39■□□□□ 0.54
CDC42BPB-201ENST00000361246 GABRG1Q8N1C3 465 aa18.39■□□□□ 0.54
CDC42BPB-201ENST00000361246 NRTNQ99748 197 aa18.39■□□□□ 0.54
CDC42BPB-201ENST00000361246 RAB22AQ9UL26 194 aa18.39■□□□□ 0.54
CDC42BPB-201ENST00000361246 TGM6O95932 706 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 HBG1P69891 147 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 HBG2P69892 147 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 TAGLNQ01995 201 aaKnown RBP18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 UPK1AO00322 258 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 PPICP45877 212 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 FLI1Q01543 452 aaPredicted RBP18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 SPRED2Q7Z698 418 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 ZNF439Q8NDP4 499 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 SLC22A13Q9Y226 551 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 SSSCA1O60232 199 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 CBR3O75828 277 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 PAPLNO95428 1278 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 RAB35Q15286 201 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 TMEM81Q6P7N7 255 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 SLC17A4Q9Y2C5 497 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 C1orf196B1AJZ1 125 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 ARPC3O15145 178 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 ZNF133P52736 654 aaPredicted RBP18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 DSCR4P56555 118 aaPredicted RBP18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 BAMBIQ13145 260 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 FZD2Q14332 565 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 RTP5Q14D33 572 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 RBMS2Q15434 407 aaKnown RBP18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 FN3KRPQ9HA64 309 aa18.39■□□□□ 0.53
CDC42BPB-201ENST00000361246 MEIOCA2RUB1 952 aa18.38■□□□□ 0.53
CDC42BPB-201ENST00000361246 SLC16A6O15403 523 aa18.38■□□□□ 0.53
CDC42BPB-201ENST00000361246 PI3P19957 117 aa18.38■□□□□ 0.53
CDC42BPB-201ENST00000361246 ZXDAP98168 799 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms