RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 TMEM104Q8NE00 496 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 LINC00052Q96N35 136 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 MS4A10Q96PG2 267 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 RSRP1Q9BUV0 290 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 MAGT1Q9H0U3 335 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 TAAR2Q9P1P5 351 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 LHX6Q9UPM6 363 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 KCPQ6ZWJ8 1503 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 A0A1W2PNV4 684 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 AP4M1O00189 453 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 HMGN4O00479 90 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 SPINT2O43291 252 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 CTXN2P0C2S0 81 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 TAS2R45P59539 299 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 RPL27P61353 136 aaKnown RBP12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 GPX8Q8TED1 209 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 CXorf58Q96LI9 332 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 ISG20L2Q9H9L3 353 aaKnown RBP12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 SLCO1B1Q9Y6L6 691 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 LOC102723971A0A1B0GUV8 181 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 TTRP02766 147 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 SMIM6P0DI80 62 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC25A4P12235 298 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 HOXD9P28356 352 aaPredicted RBP12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 DIO1P49895 249 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 ST3GAL2Q16842 350 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 POM121Q96HA1 1249 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 IKZF5Q9H5V7 419 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 FGF20Q9NP95 211 aaPredicted RBP12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 DLL4Q9NR61 685 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 PTRH2Q9Y3E5 179 aaKnown RBP12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 LEUTXA8MZ59 168 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 PMS2P11Q13670 270 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 NUMA1Q14980 2115 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 XAF1Q6GPH4 301 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 RFLNAQ6ZTI6 216 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 TCTEX1D1Q8N7M0 179 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 EXD3Q8N9H8 876 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 NHLRC2Q8NBF2 726 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC2A9Q9NRM0 540 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 CLEC3BP05452 202 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 HSD17B7P56937 341 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 PMP22Q01453 160 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 GJC3Q8NFK1 279 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 OR51E1Q8TCB6 317 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 DERL3Q96Q80 235 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 NUDT9Q9BW91 350 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 TCRBV5S1A1TA0A578 114 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 CASP6P55212 293 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 SSBP1Q04837 148 aaKnown RBP12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 DEFB133Q30KQ1 61 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 PLXDC2Q6UX71 529 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 BATF2Q8N1L9 274 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 C11orf42Q8N5U0 333 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC35A4Q96G79 324 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 USB1Q9BQ65 265 aaKnown RBP12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 SHARPINQ9H0F6 387 aa12.24□□□□□ -0.45
CCDC144A-203ENST00000360495 LMO7Q8WWI1 1683 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 GLSO94925 669 aaPredicted RBP12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 MT-ATP6P00846 226 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 KCNJ3P48549 501 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 CDONQ4KMG0 1287 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 TMEM64Q6YI46 380 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 LCORQ96JN0 433 aaPredicted RBP12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC35E1Q96K37 410 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 CYSLTR2Q9NS75 346 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 SIRT3Q9NTG7 399 aaPredicted RBP12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 FBXO4Q9UKT5 387 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 RCL1Q9Y2P8 373 aaKnown RBP12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 ARRDC5A6NEK1 342 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 DBX1A6NMT0 343 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 CLDN34H7C241 214 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 M0R082 166 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 TIMM8AO60220 97 aaPredicted RBP12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 AVPR2P30518 371 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 CHRNB4P30926 498 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 NTHL1P78549 312 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 AGBL4Q5VU57 503 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 C1orf140Q5VVS0 124 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 ANKRD16Q6P6B7 361 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 CNEP1R1Q8N9A8 125 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 APH1AQ96BI3 265 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 HHIPQ96QV1 700 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 TPSD1Q9BZJ3 242 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 CTSFQ9UBX1 484 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 PLPP1O14494 284 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 DEGS1O15121 323 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC25A6P12236 298 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 Q1RN00 199 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 NCMAPQ5T1S8 102 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 HTR3DQ70Z44 454 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 TMEM174Q8WUU8 243 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 HGDQ93099 445 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 BARHL1Q9BZE3 327 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 NMES1Q9C002 83 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 PSENENQ9NZ42 101 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 CA14Q9ULX7 337 aa12.23□□□□□ -0.45
CCDC144A-203ENST00000360495 GOLT1BQ9Y3E0 138 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms