RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TCTEX1D1Q8N7M0 179 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 PCED1AQ9H1Q7 454 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 GABRQQ9UN88 632 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 PIGLQ9Y2B2 252 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 ABCD3P28288 659 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 RPL12P30050 165 aaKnown RBP12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 OR5I1Q13606 314 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 OTUD1Q5VV17 481 aaPredicted RBP12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 OR2A2Q6IF42 318 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 MACROD1Q9BQ69 325 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 HES4Q9HCC6 221 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 HSPB2A8KAH6 182 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 OR2J3O76001 311 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 IQCF3P0C7M6 154 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 TM4SF1P30408 202 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 HSPB2Q16082 182 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 IFI44Q8TCB0 444 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 NEIL2Q969S2 332 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 WDR61Q9GZS3 305 aaKnown RBP12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 MCM3APO60318 1980 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF17P17021 662 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 GPR12P47775 334 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 MRPL2Q5T653 305 aaKnown RBP12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 FOXB2Q5VYV0 432 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 KIAA1958Q8N8K9 716 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 PADI1Q9ULC6 663 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 M0QZK8 103 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 GGCTO75223 188 aaKnown RBP12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 EDN1P05305 212 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 PTGER1P34995 402 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 PCBP4P57723 403 aaKnown RBP12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 HOXA4Q00056 320 aaPredicted RBP12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 DBX1A6NMT0 343 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 HNRNPA1L2Q32P51 320 aaKnown RBP12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 ETV3LQ6ZN32 361 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 BCDIN3DQ7Z5W3 292 aaKnown RBP12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 ANKLE1Q8NAG6 615 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 MDGA1Q8NFP4 955 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 PRSS38A1L453 326 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 SCRG1O75711 98 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 CPEP16870 476 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF789Q5FWF6 425 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 GLCCI1Q86VQ1 547 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 NAXDQ8IW45 347 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 GOT1L1Q8NHS2 421 aaPredicted RBP12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 LMO3Q8TAP4 145 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 SEH1LQ96EE3 360 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 LDB3O75112 727 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 TWSG1Q9GZX9 223 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 SGK494L7N484 410 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 GOSR1O95249 250 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 SOX18P35713 384 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 EDDM3BP56851 147 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 GABREP78334 506 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 DPY19L2P2Q6ZN68 376 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 MBOAT2Q6ZWT7 520 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF573Q86YE8 665 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF687Q8N1G0 1237 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 WDTC1Q8N5D0 677 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 PTDSS2Q9BVG9 487 aa12.12□□□□□ -0.47
SRGAP3-201ENST00000360413 POU3F3P20264 500 aaPredicted RBP12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 P2RY2P41231 377 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 OR8G1Q15617 311 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 LSMEM1Q8N8F7 131 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 OR5K2Q8NHB8 316 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 MS4A10Q96PG2 267 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 BCL2L11O43521 198 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 MAMDC4Q6UXC1 1216 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF813Q6ZN06 617 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 OR2M3Q8NG83 312 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 B3GALT5Q9Y2C3 310 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 NSG2Q9Y328 171 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 EDN3P14138 238 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 ERVFC1-1P60608 527 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 SMAD2Q15796 467 aaKnown RBP12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 BAP18Q8IXM2 172 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 SCCPDHQ8NBX0 429 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 LHX4Q969G2 390 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF385DQ9H6B1 395 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 MMP26Q9NRE1 261 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF346Q9UL40 294 aaKnown RBP12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 TRAV36DV7A0A075B6V5 113 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 FIGNL2A6NMB9 653 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 UBE2MP61081 183 aaKnown RBP12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 DGCR2P98153 550 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 LSRQ86X29 649 aaPredicted RBP12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 TMEM176BQ3YBM2 270 aaPredicted RBP12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF485Q8NCK3 441 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 DOCK11Q5JSL3 2073 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 CCDC187A0A096LP49 1063 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 CD68P34810 354 aaPredicted RBP12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 GZMKP49863 264 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 EMC4Q5J8M3 183 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 CLLU1Q5K131 121 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 SCMH1Q96GD3 660 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 COMMD5Q9GZQ3 224 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 A0A1B0GTW7 788 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 NDUFB7P17568 137 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 ELAVL4P26378 380 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms