RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 YIPF6Q96EC8 236 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 OR11A1Q9GZK7 315 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 DNAJB12Q9NXW2 375 aaKnown RBP6.34□□□□□ -1.39
RAB5B-201ENST00000360299 B9D1Q9UPM9 204 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 A8MV72 311 aaPredicted RBP6.34□□□□□ -1.39
RAB5B-201ENST00000360299 XRCC2O43543 280 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 GLSO94925 669 aaPredicted RBP6.34□□□□□ -1.39
RAB5B-201ENST00000360299 CBX7O95931 251 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 KNG1P01042 644 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 SLC17A1Q14916 467 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 TATDN3Q17R31 274 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 WIPI1Q5MNZ9 446 aaPredicted RBP6.34□□□□□ -1.39
RAB5B-201ENST00000360299 GLYATL3Q5SZD4 288 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 UBE3DQ7Z6J8 389 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 MRGPRGQ86SM5 289 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 TRAPPC6BQ86SZ2 158 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 GALNT11Q8NCW6 608 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 OR2V1Q8NHB1 315 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 MMP28Q9H239 520 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 LIN7BQ9HAP6 207 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 R4GMQ9 66 aa6.34□□□□□ -1.39
RAB5B-201ENST00000360299 A0A0A6YYH2 397 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 A6NJ64 397 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 GABARAPH6UMI1 98 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 I3L521 148 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 IFNA1P01562 189 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 IGFBP1P08833 259 aaPredicted RBP6.34□□□□□ -1.4
RAB5B-201ENST00000360299 BLVRBP30043 206 aaPredicted RBP6.34□□□□□ -1.4
RAB5B-201ENST00000360299 FOXL2P58012 376 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 BTG1P62324 171 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 RPP30P78346 268 aaKnown RBP6.34□□□□□ -1.4
RAB5B-201ENST00000360299 FUT7Q11130 342 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 PDZD9Q8IXQ8 264 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 ACBD4Q8NC06 268 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 OR4K15Q8NH41 348 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 DYNC2LI1Q8TCX1 351 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 PDCD1LG2Q9BQ51 273 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 OPA3Q9H6K4 179 aa6.34□□□□□ -1.4
RAB5B-201ENST00000360299 MYEF2Q9P2K5 600 aaKnown RBP6.34□□□□□ -1.4
RAB5B-201ENST00000360299 TRAV1-2A0A0B4J238 106 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 AIPO00170 330 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 GPR137BO60478 399 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 GPX5O75715 221 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 ACTL6BO94805 426 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 TOXO94900 526 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 IL2RGP31785 369 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 VEGFCP49767 419 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 CAV3P56539 151 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 PMP22Q01453 160 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 FOXF1Q12946 379 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 CLN3Q13286 438 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 KCNJ8Q15842 424 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 KDM8Q8N371 416 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 M1APQ8TC57 530 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 CMTM3Q96MX0 182 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 OPALINQ96PE5 141 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 EMC6Q9BV81 110 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 UNKLQ9H9P5 680 aaKnown RBP6.33□□□□□ -1.4
RAB5B-201ENST00000360299 BCO1Q9HAY6 547 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 ACOXLQ9NUZ1 547 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 EHFQ9NZC4 300 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 LRP5LA4QPB2 252 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 CYR61O00622 381 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 SLC2A10O95528 541 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 TRAPPC2P0DI81 140 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 TRAPPC2BP0DI82 140 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 APEX1P27695 318 aaKnown RBP6.33□□□□□ -1.4
RAB5B-201ENST00000360299 HLA-DMAP28067 261 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 RAD52P43351 418 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 SEC61A1P61619 476 aaKnown RBP6.33□□□□□ -1.4
RAB5B-201ENST00000360299 EBPQ15125 230 aaKnown RBP6.33□□□□□ -1.4
RAB5B-201ENST00000360299 HEPHL1Q6MZM0 1159 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 DNAAF1Q8NEP3 725 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 OR4N2Q8NGD1 307 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 OR51D1Q8NGF3 324 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 ZNF391Q9UJN7 358 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 HRH3Q9Y5N1 445 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 FNDC1Q4ZHG4 1894 aaPredicted RBP6.33□□□□□ -1.4
RAB5B-201ENST00000360299 CROCCQ5TZA2 2017 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 LOC107986453A0A1B0GWG9 222 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 A0A1W2PNR3 127 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 TMEM82A0PJX8 343 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 OR6C6A6NF89 314 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 M0R135 149 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 GOSR2O14653 212 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 CXCL13O43927 109 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 TIMM8AO60220 97 aaPredicted RBP6.33□□□□□ -1.4
RAB5B-201ENST00000360299 PRAMEF4O60810 478 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 FGF9P31371 208 aaPredicted RBP6.33□□□□□ -1.4
RAB5B-201ENST00000360299 CSF2RBP32927 897 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 TGM4P49221 684 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 FXYD4P59646 89 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 PMPCAQ10713 525 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 SHBQ15464 509 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 MSMO1Q15800 293 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 PRAMEF9Q5VWM5 478 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 C1QL3Q5VWW1 255 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 STEAP3Q658P3 488 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 OR2A2Q6IF42 318 aa6.33□□□□□ -1.4
RAB5B-201ENST00000360299 PRSS41Q7RTY9 318 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms