RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ABHD4Q8TB40 342 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 HSD17B8Q92506 261 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 RNF166Q96A37 237 aaPredicted RBP12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 SNRNP40Q96DI7 357 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 ZNF837Q96EG3 531 aaPredicted RBP12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 SLX1AQ9BQ83 275 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 WACQ9BTA9 647 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 MED18Q9BUE0 208 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 GTF2A1LQ9UNN4 478 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 EMC9Q9Y3B6 208 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 R4GMQ9 66 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 A1L4Q6 167 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 FIGNL2A6NMB9 653 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 OR4C45A6NMZ5 311 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 LOC110117498-PIK3R3F6TDL0 507 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 WDR1O75083 606 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 GATBO75879 557 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 IGHV3-9P01782 118 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 TPOP07202 933 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 B4GALT1P15291 398 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 ABOP16442 354 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 MYL9P24844 172 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 GRNP28799 593 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 HSD11B1P28845 292 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 OR3A2P47893 321 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 PSMA6P60900 246 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 PCBD1P61457 104 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 RBPJQ06330 500 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 SCRN3Q0VDG4 424 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 WDR38Q5JTN6 314 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 NSUN5P2Q63ZY6 315 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 ZNF585AQ6P3V2 769 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 ZNF813Q6ZN06 617 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 TMEM91Q6ZNR0 172 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 FGD2Q7Z6J4 655 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 CATSPERDQ86XM0 798 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 UBE2J2Q8N2K1 259 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 LRRC18Q8N456 261 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 ZNF676Q8N7Q3 588 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 OR10S1Q8NGN2 331 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 PHYHIPQ92561 330 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 THRSPQ92748 146 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 PDCD1LG2Q9BQ51 273 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 C12orf49Q9H741 205 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 MOB1AQ9H8S9 216 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 FRRS1LQ9P0K9 344 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 FBXL3Q9UKT7 428 aa12.16□□□□□ -0.46
PDLIM5-203ENST00000359265 F8P00451 2351 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 OTOGQ6ZRI0 2925 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 TTLL8A6PVC2 850 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 RER1O15258 196 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 ZNHIT1O43257 154 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 SRSF10O75494 262 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 SC5DO75845 299 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 ARL6IP5O75915 188 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 CLPXO76031 633 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 ZFPL1O95159 310 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 CDRT1O95170 752 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 HOXD4P09016 255 aaPredicted RBP12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 KIR3DL2P43630 455 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 HIST1H3AP68431 136 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 MFGE8Q08431 387 aaPredicted RBP12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 ACSM3Q53FZ2 586 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 HIST2H3PS2Q5TEC6 136 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 GFRALQ6UXV0 394 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 HIST2H3AQ71DI3 136 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 CEACAM19Q7Z692 300 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 SYT9Q86SS6 491 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 PRSS35Q8N3Z0 413 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 SLC22A24Q8N4F4 322 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 OR13C5Q8NGS8 318 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 DCLRE1CQ96SD1 692 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 KRTAP3-3Q9BYR6 98 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 KRTAP3-2Q9BYR7 98 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 HDHD2Q9H0R4 259 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 CXorf56Q9H5V9 222 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 PNRC2Q9NPJ4 139 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 DDX28Q9NUL7 540 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 ASF1BQ9NVP2 202 aa12.15□□□□□ -0.46
PDLIM5-203ENST00000359265 SVILO95425 2214 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 ARPC4-TTLL3A0A0A6YYG9 625 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 TMEM269A0A1B0GVZ9 245 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 MBD3L4A6NDZ8 208 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 MBD3L3A6NE82 208 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 MBD3L5A6NJ08 208 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 PRRG2O14669 202 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 CASKO14936 926 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 PNPP00491 289 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 EDN3P14138 238 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 MAPK3P27361 379 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 SDC2P34741 201 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 MTNR1BP49286 362 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 MMP16P51512 607 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 ARF1P84077 181 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 FAPQ12884 760 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 INSL4Q14641 139 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 RAB35Q15286 201 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 GUSBP1Q15486 140 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 EIF2S3LQ2VIR3 472 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 ZMAT1Q5H9K5 638 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms