RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 PDCD10Q9BUL8 212 aa16.65■□□□□ 0.26
SNX11-201ENST00000359238 TTTY10Q9BZA0 68 aa16.65■□□□□ 0.26
SNX11-201ENST00000359238 TRAV14DV4A0A0A6YYC5 116 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 SHISA8B8ZZ34 492 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 EIF3GO75821 320 aaKnown RBP eCLIP16.64■□□□□ 0.25
SNX11-201ENST00000359238 MT-CO3P00414 261 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 RLN1P04808 185 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 CDK2P24941 298 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 RPS4XP62701 263 aaKnown RBP16.64■□□□□ 0.25
SNX11-201ENST00000359238 SIRPAP78324 504 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 HES3Q5TGS1 186 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 CDCP2Q5VXM1 449 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 RPL22L1Q6P5R6 122 aaKnown RBP16.64■□□□□ 0.25
SNX11-201ENST00000359238 ZNF546Q86UE3 836 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 SYS1Q8N2H4 156 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 KCNRGQ8N5I3 272 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 MMP25Q9NPA2 562 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 NOX4Q9NPH5 578 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 CNTRLQ7Z7A1 2325 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 LAMA5O15230 3695 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 F13BP05160 661 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 ACAA1P09110 424 aaPredicted RBP16.64■□□□□ 0.25
SNX11-201ENST00000359238 SPP1P10451 314 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 PTHLHP12272 177 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 HAAOP46952 286 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 TAS2R20P59543 309 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 UBE2MP61081 183 aaKnown RBP16.64■□□□□ 0.25
SNX11-201ENST00000359238 PPIAP62937 165 aaKnown RBP16.64■□□□□ 0.25
SNX11-201ENST00000359238 PCOLCEQ15113 449 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 TRIP6Q15654 476 aaKnown RBP16.64■□□□□ 0.25
SNX11-201ENST00000359238 GUCA2BQ16661 112 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 AVPI1Q5T686 147 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 RPL13AP3Q6NVV1 102 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 C11orf88Q6PI97 169 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 TIPARPQ7Z3E1 657 aaKnown RBP16.64■□□□□ 0.25
SNX11-201ENST00000359238 OR2W3Q7Z3T1 314 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 KRT77Q7Z794 578 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 ZNF440Q8IYI8 595 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 OR6S1Q8NH40 331 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 CMSS1Q9BQ75 279 aaKnown RBP16.64■□□□□ 0.25
SNX11-201ENST00000359238 FAM117AQ9C073 453 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 MYEF2Q9P2K5 600 aaKnown RBP16.64■□□□□ 0.25
SNX11-201ENST00000359238 MUC6Q6W4X9 2439 aa16.64■□□□□ 0.25
SNX11-201ENST00000359238 PCNX2A6NKB5 2137 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 RIIAD1A6NNX1 92 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 MAGEB4O15481 346 aaPredicted RBP16.63■□□□□ 0.25
SNX11-201ENST00000359238 SMIM6P0DI80 62 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 CALCBP10092 127 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 KCNJ3P48549 501 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 ACTA2P62736 377 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 ACTG2P63267 376 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 C10orf91Q5T1B1 145 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 ZNF704Q6ZNC4 412 aaPredicted RBP16.63■□□□□ 0.25
SNX11-201ENST00000359238 C10orf53Q8N6V4 93 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 OR6N1Q8NGY5 312 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 NMNAT3Q96T66 252 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 OR11A1Q9GZK7 315 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 TMEM138Q9NPI0 162 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 FOXJ2Q9P0K8 574 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 OR5V1Q9UGF6 321 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 TRAV20A0A0B4J274 112 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 TRBV2A0A0J9YWF9 115 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 A0A1W2PQD3 144 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 KANTRA0A1W2PQU2 76 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 C9orf172C9J069 976 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 SULT1C2O00338 296 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 PIN1P1O15428 100 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 RAD1O60671 282 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 NDUFB2O95178 105 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 FOSL1P15407 271 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 FOXK1P85037 733 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 JMJD6Q6NYC1 403 aaPredicted RBP16.63■□□□□ 0.25
SNX11-201ENST00000359238 GLB1L2Q8IW92 636 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 DEFB124Q8NES8 71 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 OR10G3Q8NGC4 313 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 NANPQ8TBE9 248 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 GPR119Q8TDV5 335 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 LIN37Q96GY3 246 aaPredicted RBP16.63■□□□□ 0.25
SNX11-201ENST00000359238 TAAR9Q96RI9 348 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 COL25A1Q9BXS0 654 aaPredicted RBP16.63■□□□□ 0.25
SNX11-201ENST00000359238 MBD2Q9UBB5 411 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 MYOTQ9UBF9 498 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 HS3ST3B1Q9Y662 390 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 V9GY05 133 aa16.63■□□□□ 0.25
SNX11-201ENST00000359238 OR6C68A6NDL8 312 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 ADCYAP1P18509 176 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 SLC6A6P31641 620 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 RPL4P36578 427 aaKnown RBP16.62■□□□□ 0.25
SNX11-201ENST00000359238 ZNF345Q14585 488 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 OR2Y1Q8NGV0 311 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 NUBPLQ8TB37 319 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 STK35Q8TDR2 534 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 MIB2Q96AX9 1013 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 Q96M85 177 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 TSSK2Q96PF2 358 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 ZNF251Q9BRH9 671 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 WDR13Q9H1Z4 485 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 TINAGQ9UJW2 476 aa16.62■□□□□ 0.25
SNX11-201ENST00000359238 CARHSP1Q9Y2V2 147 aaKnown RBP16.62■□□□□ 0.25
SNX11-201ENST00000359238 ZFHX2Q9C0A1 2572 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms