RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TMEM231Q9H6L2 316 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 GAREM1Q9H706 876 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 EXOSC3Q9NQT5 275 aaKnown RBP12.45□□□□□ -0.42
VCP-201ENST00000358901 SLC22A11Q9NSA0 550 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 FBXO34Q9NWN3 711 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 PADI1Q9ULC6 663 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 U3KQ87 197 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 ST8SIA3O43173 380 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 HBE1P02100 147 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 HRH1P35367 487 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 BAMBIQ13145 260 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 ATPAF1Q5TC12 328 aaPredicted RBP12.44□□□□□ -0.42
VCP-201ENST00000358901 LINC00696Q6ZRV3 163 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 PRSS41Q7RTY9 318 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 SEMA6DQ8NFY4 1073 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 GPR119Q8TDV5 335 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 ZCCHC4Q9H5U6 513 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 SERTAD4Q9NUC0 356 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 NECAP2Q9NVZ3 263 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 PCYT1BQ9Y5K3 369 aaPredicted RBP12.44□□□□□ -0.42
VCP-201ENST00000358901 KIAA1217Q5T5P2 1943 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 H0YIG0 161 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 CDC42EP2O14613 210 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 CLDN1O95832 211 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 GNB3P16520 340 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 MAGEB1P43366 347 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 ZNF133P52736 654 aaPredicted RBP12.44□□□□□ -0.42
VCP-201ENST00000358901 RNLSQ5VYX0 342 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 C17orf47Q8NEP4 570 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 PPP1R1CQ8WVI7 109 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 NIPSNAP3BQ9BS92 247 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 NKX6-2Q9C056 277 aaPredicted RBP12.44□□□□□ -0.42
VCP-201ENST00000358901 ZNF576Q9H609 170 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 BCO1Q9HAY6 547 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 SIRT3Q9NTG7 399 aaPredicted RBP12.44□□□□□ -0.42
VCP-201ENST00000358901 GNG12Q9UBI6 72 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 A0A0B4J2E0 115 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 A0A1B0GX12 115 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 XRCC3O43542 346 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 RGS11O94810 467 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 TPOP07202 933 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 MVDP53602 400 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 TLE4Q04727 773 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 HMGN3Q15651 99 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 TAF9Q16594 264 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 OR52W1Q6IF63 320 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 OR10Z1Q8NGY1 313 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 C14orf79Q96F83 325 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 RTTNQ86VV8 2226 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 ZFC3H1O60293 1989 aaKnown RBP12.44□□□□□ -0.42
VCP-201ENST00000358901 PLPP2O43688 288 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 ADRB1P08588 477 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 P2RX3P56373 397 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 UBE2IP63279 158 aaKnown RBP12.44□□□□□ -0.42
VCP-201ENST00000358901 CATR1Q13166 79 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 DND1Q8IYX4 353 aaKnown RBP12.44□□□□□ -0.42
VCP-201ENST00000358901 ZBTB44Q8NCP5 570 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 NT5CQ8TCD5 201 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 TAAR8Q969N4 342 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 ZNF2Q9BSG1 426 aaPredicted RBP12.44□□□□□ -0.42
VCP-201ENST00000358901 SLC39A9Q9NUM3 307 aa12.44□□□□□ -0.42
VCP-201ENST00000358901 CKAP5Q14008 2032 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 A8MXE2 369 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 FFAR1O14842 300 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 NKX2-2O95096 273 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 OR13C7P0DN81 318 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 HBG1P69891 147 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 HBG2P69892 147 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 WDSUB1Q8N9V3 476 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 SFT2D1Q8WV19 159 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 ABHD1Q96SE0 405 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 S1PR5Q9H228 398 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 TUBG2Q9NRH3 451 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 R4GMQ9 66 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 URGCP-MRPS24S4R325 110 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 FAM221AA4D161 298 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 SLC17A2O00624 439 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 EFSO43281 561 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 ZNF354AO60765 605 aaPredicted RBP12.43□□□□□ -0.42
VCP-201ENST00000358901 WNT1P04628 370 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 LAP3P28838 519 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 GABRA2P47869 451 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 RBP2P50120 134 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 DCAF12Q5T6F0 453 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 BAP18Q8IXM2 172 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 OR51H1Q8NH63 302 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 KTI12Q96EK9 354 aaPredicted RBP12.43□□□□□ -0.42
VCP-201ENST00000358901 ZNF814B7Z6K7 855 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 TPPPO94811 219 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 TCN2P20062 427 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 IL10RAQ13651 578 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 TESK1Q15569 626 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 BATFQ16520 125 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 CD300LDQ6UXZ3 194 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 ZFP82Q8N141 532 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 UPRTQ96BW1 309 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 MAP6Q96JE9 813 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 AP1S3Q96PC3 154 aa12.43□□□□□ -0.42
VCP-201ENST00000358901 UTP23Q9BRU9 249 aaKnown RBP12.43□□□□□ -0.42
VCP-201ENST00000358901 POMT2Q9UKY4 750 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms