RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 PUSL1Q8N0Z8 303 aaKnown RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SUMF1Q8NBK3 374 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 TMEM37Q8WXS4 190 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 PITPNC1Q9UKF7 332 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 AKAP13Q12802 2813 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 LOC102724200A0A096LPH7 203 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 RNF224P0DH78 156 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 AVPR2P30518 371 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 PTGER1P34995 402 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 PPP1R1AQ13522 171 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SLC35D3Q5M8T2 416 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 DERL3Q96Q80 235 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SFXN1Q9H9B4 322 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 GALR1P47211 349 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 PRLHRP49683 370 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 CASP6P55212 293 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 MRPL2Q5T653 305 aaKnown RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 FAM27D1Q5T7N8 215 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 LRP11Q86VZ4 500 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 LMF2Q9BU23 707 aaKnown RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 NKX2-1P43699 371 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 SULT1A2P50226 295 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 SEC13P55735 322 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 GUCA2AQ02747 115 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF345Q14585 488 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 LURAP1LQ8IV03 231 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 RASD2Q96D21 266 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 NKX2-4Q9H2Z4 354 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 PTGES2Q9H7Z7 377 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 A0A1W2PPE2 198 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 KDM4EB2RXH2 506 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 ST8SIA3O43173 380 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 CTNSO60931 367 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 GJB3O75712 270 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 CXCL3P19876 107 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 CEBPEQ15744 281 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 NCR3LG1Q68D85 454 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 FAHD2BQ6P2I3 314 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 RBM45Q8IUH3 476 aaKnown RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 ADAMTS18Q8TE60 1221 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 FAHD2AQ96GK7 314 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 CCNL2Q96S94 520 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 NUDT9Q9BW91 350 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 HINT2Q9BX68 163 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 ENDOGQ14249 297 aaKnown RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 SAT2Q96F10 170 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 MTCH1Q9NZJ7 389 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 TP53TG5Q9Y2B4 290 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 FLVCR1Q9Y5Y0 555 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 PDCD11Q14690 1871 aaKnown RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 PRAMEF27A3QJZ7 478 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 CXorf65A6NEN9 183 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 CLDN34H7C241 214 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 EDN3P14138 238 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 PRAMEF9Q5VWM5 478 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 CPEB2Q7Z5Q1 589 aaKnown RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 SPNS2Q8IVW8 549 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 HMGN4O00479 90 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 BAXQ07812 192 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 PDLIM3Q53GG5 364 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 AGBL4Q5VU57 503 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 GRINAQ7Z429 371 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 REC114Q7Z4M0 266 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 METTL27Q8N6F8 245 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 MAP3K3Q99759 626 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 F5H5K5 113 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 NPIPA3F8WFD2 350 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 IGHG1P01857 330 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 NPBWR1P48145 328 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 DHRS2Q13268 280 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 Q5BKY6 102 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 MARCH1Q8TCQ1 289 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 RGP1Q92546 391 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 WDR76Q9H967 626 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 ARL2-SNX15V9GYD0 113 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 A0A087WUU8 490 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 STC2O76061 302 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 GJB5O95377 273 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 SLC2A1P11166 492 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 TYRP1P17643 537 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 HOXA11P31270 313 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 TOMM34Q15785 309 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 PFN4Q8NHR9 129 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 JAM3Q9BX67 310 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 A0A1W2PNV4 684 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 P2RY10O00398 339 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 HIST1H3AP68431 136 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 ACVR1Q04771 509 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 PLAC9Q5JTB6 97 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 GLRX5Q86SX6 157 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 PIK3IP1Q96FE7 263 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 AMDHD1Q96NU7 426 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 NKX3-1Q99801 234 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 SH3BGRL2Q9UJC5 107 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 A8MXK9 166 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 SLC31A1O15431 190 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 NOVP48745 357 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 TESK1Q15569 626 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 TRIM61Q5EBN2 209 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 HSD11B1LQ7Z5J1 315 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms