RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 BIN3Q9NQY0 253 aa5.92□□□□□ -1.46
CSDE1-203ENST00000358528 MRPS18BQ9Y676 258 aaKnown RBP5.92□□□□□ -1.46
CSDE1-203ENST00000358528 PIAS3Q9Y6X2 628 aa5.92□□□□□ -1.46
CSDE1-203ENST00000358528 LRRK1Q38SD2 2015 aa5.92□□□□□ -1.46
CSDE1-203ENST00000358528 PLXNA2O75051 1894 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 TRAV36DV7A0A075B6V5 113 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 PRSS37A4D1T9 235 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF749O43361 778 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 NAGAP17050 411 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 PSMB6P28072 239 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 CD1CP29017 333 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 SFTPDP35247 375 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 PLAURQ03405 335 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 MGAT2Q10469 447 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 CCINQ13939 588 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 PEA15Q15121 130 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 NR0B2Q15466 257 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 CHRFAM7AQ494W8 412 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 ADAD2Q8NCV1 583 aaKnown RBP5.91□□□□□ -1.46
CSDE1-203ENST00000358528 KLHDC3Q9BQ90 382 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 TMPRSS13Q9BYE2 586 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 FANCFQ9NPI8 374 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 ANKRD10Q9NXR5 420 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 HIF3AQ9Y2N7 669 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 A8MXK9 166 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 BET1O15155 118 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 SNAPINO95295 136 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 WDPCPO95876 746 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 HPP00738 406 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 NFYBP25208 207 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 CRABP1P29762 137 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 KCNJ3P48549 501 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 CLRN1P58418 232 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 FXYD4P59646 89 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 PPIAP62937 165 aaKnown RBP5.91□□□□□ -1.46
CSDE1-203ENST00000358528 EGR3Q06889 387 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 IL10RAQ13651 578 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 GGTLC2Q14390 218 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 PLEKHN1Q494U1 663 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-203ENST00000358528 TMEM244Q5VVB8 128 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 LYG2Q86SG7 212 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 PUSL1Q8N0Z8 303 aaKnown RBP5.91□□□□□ -1.46
CSDE1-203ENST00000358528 CLEC1AQ8NC01 280 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 OR51T1Q8NGJ9 327 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 OR5M8Q8NGP6 311 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 NUBPLQ8TB37 319 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 NANPQ8TBE9 248 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 RNF141Q8WVD5 230 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 C14orf79Q96F83 325 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 LCORQ96JN0 433 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-203ENST00000358528 MRGPRX1Q96LB2 322 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 JSRP1Q96MG2 331 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-203ENST00000358528 LRFN5Q96NI6 719 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 CDC6Q99741 560 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 WDR13Q9H1Z4 485 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 SLC22A11Q9NSA0 550 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 EHFQ9NZC4 300 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 ICAM5Q9UMF0 924 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 VSIG4Q9Y279 399 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 IGKV1D-42A0A075B6H8 117 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 CCDC163A0A0D9SF12 145 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 F5H5K5 113 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 H0YIG0 161 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 TRIM77I1YAP6 450 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 LINC01565O15544 149 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 SERPINA2P20848 420 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 SLC25A1P53007 311 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 RAB5BP61020 215 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF117Q03924 483 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 PRTGQ2VWP7 1150 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 C1orf140Q5VVS0 124 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 GLIPR1L1Q6UWM5 242 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 CLEC9AQ6UXN8 241 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 BAP18Q8IXM2 172 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 KCNRGQ8N5I3 272 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 TMEM229BQ8NBD8 167 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 OR52N4Q8NGI2 321 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 OR4D6Q8NGJ1 314 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 OR51E1Q8TCB6 317 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 ASB17Q8WXJ9 295 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF775Q96BV0 537 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-203ENST00000358528 TM4SF19Q96DZ7 209 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 FBXO17Q96EF6 278 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 NECAB3Q96P71 396 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-203ENST00000358528 NUDT9Q9BW91 350 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 RGCCQ9H4X1 137 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 RASL12Q9NYN1 266 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 GMEB2Q9UKD1 530 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 C14orf166Q9Y224 244 aaKnown RBP5.91□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF175Q9Y473 711 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 RNF215Q9Y6U7 377 aa5.91□□□□□ -1.46
CSDE1-203ENST00000358528 OR5K4A6NMS3 321 aa5.9□□□□□ -1.46
CSDE1-203ENST00000358528 HLA-DOBP13765 273 aa5.9□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF93P35789 620 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-203ENST00000358528 BLKP51451 505 aa5.9□□□□□ -1.46
CSDE1-203ENST00000358528 BIDP55957 195 aa5.9□□□□□ -1.46
CSDE1-203ENST00000358528 SERTAD2Q14140 314 aa5.9□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF141Q15928 474 aa5.9□□□□□ -1.46
CSDE1-203ENST00000358528 TMEM240Q5SV17 173 aa5.9□□□□□ -1.46
CSDE1-203ENST00000358528 AVPI1Q5T686 147 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms