RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 A0A1B0GWA3 101 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 hCG_1809904A0A1W2PP81 198 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 A0A1W2PR64 198 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 A0A1W2PRV1 198 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 CRYM-AS1A6NIL9 109 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 VIPR2P41587 438 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 PTTG1IPP53801 180 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 PFN3P60673 137 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 IKZF1Q13422 519 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 OR2A2Q6IF42 318 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 C19orf35Q6ZS72 473 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 HSD11B1LQ7Z5J1 315 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 INTS12Q96CB8 462 aaKnown RBP8.03□□□□□ -1.12
COL6A6-201ENST00000358511 RPUSD4Q96CM3 377 aaKnown RBP8.03□□□□□ -1.12
COL6A6-201ENST00000358511 RBM14Q96PK6 669 aaKnown RBP8.03□□□□□ -1.12
COL6A6-201ENST00000358511 CSF3RQ99062 836 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 EDEM2Q9BV94 578 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 SUSD2Q9UGT4 822 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 OR8U8P0C7N1 319 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 ACSM5Q6NUN0 579 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 GRASPQ7Z6J2 395 aaPredicted RBP8.03□□□□□ -1.12
COL6A6-201ENST00000358511 NLGN4YQ8NFZ3 816 aaPredicted RBP8.03□□□□□ -1.12
COL6A6-201ENST00000358511 NUDCD2Q8WVJ2 157 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 C2orf50Q96LR7 162 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 CLSTN3Q9BQT9 956 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 HINT3Q9NQE9 182 aaKnown RBP8.03□□□□□ -1.12
COL6A6-201ENST00000358511 SPATA6Q9NWH7 488 aaPredicted RBP8.03□□□□□ -1.12
COL6A6-201ENST00000358511 YLPM1P49750 1951 aaKnown RBP8.03□□□□□ -1.12
COL6A6-201ENST00000358511 UBE2NP61088 152 aaKnown RBP8.03□□□□□ -1.12
COL6A6-201ENST00000358511 GPNMBQ14956 572 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 OR10J5Q8NHC4 309 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 RXFP4Q8TDU9 374 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 FLVCR1Q9Y5Y0 555 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 NID1P14543 1247 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 JAG1P78504 1218 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 MCATQ8IVS2 390 aaKnown RBP8.03□□□□□ -1.12
COL6A6-201ENST00000358511 EXD3Q8N9H8 876 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 OR2G2Q8NGZ5 317 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 ZC3HAV1LQ96H79 300 aaKnown RBP8.03□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF426Q9BUY5 554 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 WWTR1Q9GZV5 400 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 TAS2R4Q9NYW5 299 aa8.03□□□□□ -1.12
COL6A6-201ENST00000358511 TGM5O43548 720 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 ABCD3P28288 659 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 DCAF7P61962 342 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 HHEXQ03014 270 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 ZP2Q05996 745 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 CDK5R1Q15078 307 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 ANKRD34AQ69YU3 496 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 GPX8Q8TED1 209 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 POM121Q96HA1 1249 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 MS4A8Q9BY19 250 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 SLC17A9Q9BYT1 436 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 STRADBQ9C0K7 418 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 FKRPQ9H9S5 495 aa8.02□□□□□ -1.12
COL6A6-201ENST00000358511 CGGBP1Q9UFW8 167 aaPredicted RBP8.02□□□□□ -1.12
COL6A6-201ENST00000358511 SHANK1Q9Y566 2161 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 A0A1W2PQU0 124 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 IL2RGP31785 369 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 MEOX1P50221 254 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 CTSCP53634 463 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 STAC2Q6ZMT1 411 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF66Q6ZN08 573 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 SYT9Q86SS6 491 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 TPPP3Q9BW30 176 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 PRO1933Q9H354 126 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 ISG20L2Q9H9L3 353 aaKnown RBP8.02□□□□□ -1.13
COL6A6-201ENST00000358511 ARL2-SNX15V9GYD0 113 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 TSC2P49815 1807 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 RPLP1P05386 114 aaKnown RBP8.02□□□□□ -1.13
COL6A6-201ENST00000358511 CD1BP29016 333 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 PRDX1Q06830 199 aaKnown RBP8.02□□□□□ -1.13
COL6A6-201ENST00000358511 CST6Q15828 149 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 CCL14Q16627 93 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 MFSD9Q8NBP5 474 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 OR51A2Q8NGJ7 313 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 FGGYQ96C11 551 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 FAM173AQ9BQD7 235 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 PIGLQ9Y2B2 252 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 TMEM64Q6YI46 380 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 PACRGQ96M98 296 aaPredicted RBP8.02□□□□□ -1.13
COL6A6-201ENST00000358511 DCBLD2Q96PD2 775 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 FITM1A5D6W6 292 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 P2RY10O00398 339 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 HSPB6O14558 160 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 SNAI1O95863 264 aaPredicted RBP8.02□□□□□ -1.13
COL6A6-201ENST00000358511 MT-ATP6P00846 226 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 PJVKQ0ZLH3 352 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 C9orf152Q5JTZ5 239 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 TMEM184AQ6ZMB5 413 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 CATSPERDQ86XM0 798 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 PLXDC1Q8IUK5 500 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 TTC9BQ8N6N2 239 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 STACQ99469 402 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 CDH20Q9HBT6 801 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 NXT1Q9UKK6 140 aaKnown RBP8.02□□□□□ -1.13
COL6A6-201ENST00000358511 LAMP3Q9UQV4 416 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 INSL6Q9Y581 213 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 A0A1W2PPH5 198 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 CST4P01036 141 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms