RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 RASD2Q96D21 266 aa13.12□□□□□ -0.31
IFT20-202ENST00000357896 PRSS27Q9BQR3 290 aa13.12□□□□□ -0.31
IFT20-202ENST00000357896 KCNK9Q9NPC2 374 aa13.12□□□□□ -0.31
IFT20-202ENST00000357896 VPREB3Q9UKI3 123 aa13.12□□□□□ -0.31
IFT20-202ENST00000357896 CAB39Q9Y376 341 aaPredicted RBP13.12□□□□□ -0.31
IFT20-202ENST00000357896 SGCEO43556 437 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 SNNO75324 88 aaPredicted RBP13.11□□□□□ -0.31
IFT20-202ENST00000357896 GATA4P43694 442 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 RGS6P49758 472 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 RPL27P61353 136 aaKnown RBP13.11□□□□□ -0.31
IFT20-202ENST00000357896 TOP3AQ13472 1001 aaPredicted RBP13.11□□□□□ -0.31
IFT20-202ENST00000357896 MPP2Q14168 576 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 LAPTM4AQ15012 233 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 ALG10Q5BKT4 473 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 OR2T2Q6IF00 324 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 C1orf94Q6P1W5 598 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 FBXW12Q6X9E4 464 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 CLDN22Q8N7P3 220 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 SGCDQ92629 289 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 OR52B2Q96RD2 323 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 IKZF5Q9H5V7 419 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 POLE4Q9NR33 117 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 FBLN5Q9UBX5 448 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 USH1CQ9Y6N9 552 aa13.11□□□□□ -0.31
IFT20-202ENST00000357896 IGHV3-64DA0A0J9YX35 117 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 F5H5P2 479 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 XPNPEP2O43895 674 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 OPN1SWP03999 348 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 FBP1P09467 338 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 PMELP40967 661 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 STX1BP61266 288 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 C11orf91Q3C1V1 193 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 KRT71Q3SY84 523 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 C11orf88Q6PI97 169 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 BLOC1S3Q6QNY0 202 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 TSPYL5Q86VY4 417 aaPredicted RBP13.1□□□□□ -0.31
IFT20-202ENST00000357896 CELF2-AS1Q8N7Q2 184 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 OR4D11Q8NGI4 311 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 PFN4Q8NHR9 129 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 Q8TCH9 128 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 NPRL2Q8WTW4 380 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 SIRPDQ9H106 197 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 RASSF4Q9H2L5 321 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 MMADHCQ9H3L0 296 aaPredicted RBP13.1□□□□□ -0.31
IFT20-202ENST00000357896 TMEM100Q9NV29 134 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 TENM3Q9P273 2699 aa13.1□□□□□ -0.31
IFT20-202ENST00000357896 PLXNB1O43157 2135 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 TRBV5-3A0A0A0MS03 114 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 ANKRD61A6NGH8 418 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 A6NIZ1 184 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 MLNRO43193 412 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 NDUFA2O43678 99 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 GABRA5P31644 462 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 MRPL19P49406 292 aaKnown RBP13.09□□□□□ -0.31
IFT20-202ENST00000357896 RAP1BP61224 184 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 RAP1AP62834 184 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 COX10Q12887 443 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 PAGE3Q5JUK9 113 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 SLC35E4Q6ICL7 350 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 PATL1Q86TB9 770 aaKnown RBP13.09□□□□□ -0.31
IFT20-202ENST00000357896 IGFN1Q86VF2 1251 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 SPERTQ8NA61 448 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 SLC26A7Q8TE54 656 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 TMEM239Q8WW34 195 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 RASSF5Q8WWW0 418 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 SPDL1Q96EA4 605 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 EMC7Q9NPA0 242 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 TRIM36Q9NQ86 728 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 C20orf141Q9NUB4 165 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 PTTG3PQ9NZH4 202 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 TMCC3Q9ULS5 477 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 HIF3AQ9Y2N7 669 aa13.09□□□□□ -0.31
IFT20-202ENST00000357896 A0A1B0GWJ7 208 aa13.08□□□□□ -0.32
IFT20-202ENST00000357896 RNASEK-C17orf49H0YIS7 233 aa13.08□□□□□ -0.32
IFT20-202ENST00000357896 ECDO95905 644 aaPredicted RBP13.08□□□□□ -0.32
IFT20-202ENST00000357896 VSIG8P0DPA2 414 aa13.08□□□□□ -0.32
IFT20-202ENST00000357896 FPR3P25089 353 aa13.08□□□□□ -0.32
IFT20-202ENST00000357896 ARF6P62330 175 aa13.08□□□□□ -0.32
IFT20-202ENST00000357896 CYP51A1Q16850 503 aa13.08□□□□□ -0.32
IFT20-202ENST00000357896 OXLD1Q5BKU9 147 aa13.08□□□□□ -0.32
IFT20-202ENST00000357896 OR5R1Q8NH85 324 aa13.08□□□□□ -0.32
IFT20-202ENST00000357896 TMEM255BQ8WV15 326 aa13.08□□□□□ -0.32
IFT20-202ENST00000357896 APOBEC3DQ96AK3 386 aaPredicted RBP13.08□□□□□ -0.32
IFT20-202ENST00000357896 MED31Q9Y3C7 131 aa13.08□□□□□ -0.32
IFT20-202ENST00000357896 A0A1B0GVI7 797 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 ELOVL7A1L3X0 281 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 HTR3EA5X5Y0 456 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 IQCF6A8MYZ5 107 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 SCG5P05408 212 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 TAS2R41P59536 307 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 AQP6Q13520 282 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 MAVSQ7Z434 540 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 FUNDC1Q8IVP5 155 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 NKAIN4Q8IVV8 208 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 PDZD9Q8IXQ8 264 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 BHLHE23Q8NDY6 225 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 C19orf18Q8NEA5 215 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 OR1F12Q8NHA8 337 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 SLC7A6Q92536 515 aa13.07□□□□□ -0.32
IFT20-202ENST00000357896 ZNF583Q96ND8 569 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms