RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 DLL4Q9NR61 685 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 FAM183AA6NL82 134 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 H7C1Q1 480 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 C6orf141Q5SZD1 244 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 BTNL3Q6UXE8 466 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 PRSS48Q7RTY5 328 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 Q8NA96 180 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 CMBLQ96DG6 245 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 PBOV1Q9GZY1 135 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 RABL2AQ9UBK7 228 aaPredicted RBP8.07□□□□□ -1.12
UPF2-202ENST00000357604 RABL2BQ9UNT1 228 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 MPC1Q9Y5U8 109 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 FAM230AA0A1W2PPH8 454 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 PPIHO43447 177 aaKnown RBP8.06□□□□□ -1.12
UPF2-202ENST00000357604 OR4A8P0C604 315 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 THBS4P35443 961 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 YIF1BQ5BJH7 314 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 OR52N1Q8NH53 320 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 TMED9Q9BVK6 235 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 SDK1Q7Z5N4 2213 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 PSMD9O00233 223 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 BHLHE40O14503 412 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 SPRY3O43610 288 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 SHC1P29353 583 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 LIMS1P48059 325 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 ATP5J2P56134 94 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 LHFPL3Q86UP9 236 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 OR5AS1Q8N127 324 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 SYT3Q9BQG1 590 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 ABRACLQ9P1F3 81 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 SLC1A7O00341 560 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 TRAF3IP2O43734 574 aaPredicted RBP8.06□□□□□ -1.12
UPF2-202ENST00000357604 UQCRFS1P47985 274 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 FMODQ06828 376 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 ZNF773Q6PK81 442 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 ZNF511Q8NB15 262 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 PHYHIPQ92561 330 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 SORCS2Q96PQ0 1159 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 DIABLOQ9NR28 239 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 BEX4Q9NWD9 120 aaPredicted RBP8.06□□□□□ -1.12
UPF2-202ENST00000357604 UTRNP46939 3433 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 ARHGEF17Q96PE2 2063 aaPredicted RBP8.06□□□□□ -1.12
UPF2-202ENST00000357604 A6NNC1 897 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 TMEM225BP0DP42 221 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 CD1EP15812 388 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 SDC2P34741 201 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 MNDAP41218 407 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 KIR2DL2P43627 348 aaPredicted RBP8.06□□□□□ -1.12
UPF2-202ENST00000357604 GABRA2P47869 451 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 GALEQ14376 348 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 RAB11BQ15907 218 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 OR2Z1Q8NG97 314 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 OR8B3Q8NGG8 313 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 OR8B2Q96RD0 313 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 JAM3Q9BX67 310 aa8.06□□□□□ -1.12
UPF2-202ENST00000357604 BTBD17A6NE02 478 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 ZNF716A6NP11 495 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 FFAR1O14842 300 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 ZNF780AO75290 641 aaPredicted RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 UCP2P55851 309 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 NAAAQ02083 359 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 EGR4Q05215 589 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 ADAM5Q6NVV9 412 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 RBMS3Q6XE24 437 aaKnown RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 NKAIN3Q8N8D7 197 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 ANKRD60Q9BZ19 345 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 BABAM2Q9NXR7 383 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 RBM7Q9Y580 266 aaKnown RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 HS3ST1O14792 307 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 ZIC2O95409 532 aaPredicted RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 RAC2P15153 192 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 PSMA6P60900 246 aaKnown RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 BSPH1Q075Z2 132 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 CDK5R2Q13319 367 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 SMIM21Q3B7S5 101 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 LRRC10Q5BKY1 277 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 AWAT2Q6E213 333 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 USP43Q70EL4 1123 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 LSRQ86X29 649 aaPredicted RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 NUP37Q8NFH4 326 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 PLEKHB1Q9UF11 243 aaPredicted RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 OR5V1Q9UGF6 321 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 SCN3AQ9NY46 2000 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 LOC100506127A0A0U1RQW1 187 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 DENRO43583 198 aaKnown RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 SBK2P0C263 348 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 UBBP0CG47 229 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 IL3RAP26951 378 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 SRP14P37108 136 aaKnown RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 CDKN2AP42771 156 aaKnown RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 ZNF121P58317 390 aaPredicted RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 ZNF324BQ6AW86 544 aaPredicted RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 OR51A2Q8NGJ7 313 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 OR4Q3Q8NH05 313 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 SMAP2Q8WU79 429 aaPredicted RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 RDH5Q92781 318 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 ERGIC1Q969X5 290 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 ERVK-18Q9QC07 812 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 CDK1P06493 297 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 ARPC4P59998 168 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms