RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MEX3AA1L020 520 aaKnown RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 LINC00587B1AMM8 73 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 SCDO00767 359 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 ZNF432O94892 652 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 SERPINA5P05154 406 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 NME2P22392 152 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 FCARP24071 287 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 MEOX2P50222 304 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 ELAVL1Q15717 326 aaKnown RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 SWI5Q1ZZU3 235 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 GFOD2Q3B7J2 385 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 SLC43A2Q8N370 569 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 ZSCAN1Q8NBB4 408 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 OR51F2Q8NH61 342 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 ELSPBP1Q96BH3 223 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 FGGYQ96C11 551 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 PIK3IP1Q96FE7 263 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 PHB2Q99623 299 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 NICN1Q9BSH3 213 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 CNTD2Q9H8S5 307 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 OR5AC2Q9NZP5 309 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 GSKIPQ9P0R6 139 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 SLC5A6Q9Y289 635 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 KLF2Q9Y5W3 355 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 A0A1B0GTQ1 180 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF264O43296 627 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 FBXO24O75426 580 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 EIF3GO75821 320 aaKnown RBP eCLIP9.08□□□□□ -0.96
PTPRA-203ENST00000356147 SNAPC5O75971 98 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 MUC1P15941 1255 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-203ENST00000356147 RCC1P18754 421 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-203ENST00000356147 SKP2Q13309 424 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 GPM6BQ13491 265 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 NFATC4Q14934 902 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 IGSF11Q5DX21 431 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF585AQ6P3V2 769 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 COX15Q7KZN9 410 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 OR52N4Q8NGI2 321 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 SFT2D1Q8WV19 159 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 MAFIPQ8WZ33 124 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 CNTNAP3BQ96NU0 1288 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 FOXQ1Q9C009 403 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 MRPS33Q9Y291 106 aaKnown RBP9.08□□□□□ -0.96
PTPRA-203ENST00000356147 TMEM14AQ9Y6G1 99 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 NUP210LQ5VU65 1888 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 A0A0J9YY10 115 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 A0A1W2PP11 408 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 A6NCN8 305 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 ICOSLGO75144 302 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 HTR3BO95264 441 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 UTS2O95399 124 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 IFNA6P05013 189 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 SLC25A4P12235 298 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 CXCR1P25024 350 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 PSMB6P28072 239 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 RFC3P40938 356 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 PTGFRP43088 359 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 RIDAP52758 137 aaKnown RBP9.08□□□□□ -0.96
PTPRA-203ENST00000356147 PRMT2P55345 433 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF345Q14585 488 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 VWA2Q5GFL6 755 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 SLC18B1Q6NT16 456 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 SLC25A42Q86VD7 318 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 WDFY1Q8IWB7 410 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 RNF128Q8TEB7 428 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 RNF126Q9BV68 326 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 BIN3Q9NQY0 253 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 UQCC1Q9NVA1 299 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 CLDN16Q9Y5I7 305 aa9.08□□□□□ -0.96
PTPRA-203ENST00000356147 C17orf105B2RV13 164 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 C9JQL5 133 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 RAB27BO00194 218 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 CRHP06850 196 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF806P0C7X5 589 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 RD3LP0DJH9 198 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 DAOP14920 347 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 CD1CP29017 333 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF117Q03924 483 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 ISXQ2M1V0 245 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 CLEC9AQ6UXN8 241 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 BAP18Q8IXM2 172 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 GLYATL2Q8WU03 294 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 MITD1Q8WV92 249 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 FGF14Q92915 247 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 ARL11Q969Q4 196 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 C20orf24Q9BUV8 137 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 GDF2Q9UK05 429 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-203ENST00000356147 KCNK7Q9Y2U2 307 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 TRAV20A0A0B4J274 112 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 MED19A0JLT2 244 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-203ENST00000356147 PRSS37A4D1T9 235 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 PRSS44E7EML9 344 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 EFSO43281 561 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 ACAA1P09110 424 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-203ENST00000356147 PNMTP11086 282 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 SLC2A1P11166 492 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 RNH1P13489 461 aaKnown RBP9.07□□□□□ -0.96
PTPRA-203ENST00000356147 HOXB2P14652 356 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 UNC119Q13432 240 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 DCXRQ7Z4W1 244 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms