RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 C2orf72A6NCS6 295 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 RGS11O94810 467 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 BIDP55957 195 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 FAM74A1Q5RGS3 127 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 C9orf62Q8N4C0 152 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 KCNG2Q9UJ96 466 aa11.16□□□□□ -0.62
COLCA1-201ENST00000355430 A0A0B4J2E0 115 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 A0A1B0GX12 115 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 ZNF814B7Z6K7 855 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 TIMM8AO60220 97 aaPredicted RBP11.15□□□□□ -0.62
COLCA1-201ENST00000355430 IFNA5P01569 189 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 ACSM4P0C7M7 580 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 ACHEP22303 614 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 KIR2DL1P43626 348 aaPredicted RBP11.15□□□□□ -0.62
COLCA1-201ENST00000355430 NPY4RP50391 375 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 ZXDCQ2QGD7 858 aaPredicted RBP11.15□□□□□ -0.62
COLCA1-201ENST00000355430 C1orf140Q5VVS0 124 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 TMEM211Q6ICI0 200 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 ZNF770Q6IQ21 691 aaPredicted RBP11.15□□□□□ -0.62
COLCA1-201ENST00000355430 C16orf52Q8NHV5 167 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 FSCN3Q9NQT6 498 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 P4HTMQ9NXG6 502 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 KCNS2Q9ULS6 477 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 NINQ8N4C6 2090 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 OR2W5A6NFC9 320 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 GMDSO60547 372 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 SLC25A30Q5SVS4 291 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 RNF141Q8WVD5 230 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 TCEAL3Q969E4 200 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 TIMD4Q96H15 378 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 SLCO1C1Q9NYB5 712 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 PDCD11Q14690 1871 aaKnown RBP11.15□□□□□ -0.62
COLCA1-201ENST00000355430 LOC107986453A0A1B0GWG9 222 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 TMEM235A6NFC5 223 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 LANCL1O43813 399 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 CXCL3P19876 107 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 CPEB3Q8NE35 698 aaKnown RBP11.15□□□□□ -0.62
COLCA1-201ENST00000355430 GPR87Q9BY21 358 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 NXF5Q9H1B4 397 aaKnown RBP11.15□□□□□ -0.62
COLCA1-201ENST00000355430 C12orf49Q9H741 205 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 F5P12259 2224 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 ADRB1P08588 477 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 OR4E1P0C645 316 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 ZNF529Q6P280 563 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 OR11H7Q8NGC8 314 aa11.15□□□□□ -0.62
COLCA1-201ENST00000355430 TMEM200CA6NKL6 621 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 IGHA1P01876 353 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF93P35789 620 aaPredicted RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 NUBP1P53384 320 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 TAS2R46P59540 309 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF85Q03923 595 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 PLA2G7Q13093 441 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 ACTBL2Q562R1 376 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF362Q5T0B9 420 aaPredicted RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 SFTPA1Q8IWL2 248 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 NKAIN3Q8N8D7 197 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 ST8SIA2Q92186 375 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 HRH3Q9Y5N1 445 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 SELENOPP49908 381 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 MECP2P51608 486 aaKnown RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 CNN3Q15417 329 aaKnown RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 JMJD6Q6NYC1 403 aaPredicted RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 YRDCQ86U90 279 aaKnown RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 CCDC71LQ8N9Z2 235 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 OR56B1Q8NGI3 324 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 OR10R2Q8NGX6 335 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 OR2G2Q8NGZ5 317 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 YIPF5Q969M3 257 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 FKRPQ9H9S5 495 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 OR5H14A6NHG9 310 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 A8MVM7 634 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 PATE3B3GLJ2 98 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 K7EPK0 472 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 EGR3Q06889 387 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 ZIC1Q15915 447 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 ACKR1Q16570 336 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 FAM71E2Q8N5Q1 922 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 NKX3-1Q99801 234 aaPredicted RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 S1PR5Q9H228 398 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 SLC25A32Q9H2D1 315 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 KCNJ16Q9NPI9 418 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 TUBAL3A6NHL2 446 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 NRG2O14511 850 aaPredicted RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 DRD3P35462 400 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 APOBEC1P41238 236 aaKnown RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 HTR5AP47898 357 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF766Q5HY98 468 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 EMC4Q5J8M3 183 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 BEND4Q6ZU67 534 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF775Q96BV0 537 aaPredicted RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 WDR89Q96FK6 387 aaPredicted RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 WFDC6Q9BQY6 131 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 ARID1BQ8NFD5 2236 aaPredicted RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 BRCA1P38398 1863 aaKnown RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 NYNRINQ9P2P1 1898 aaKnown RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 XRCC3O43542 346 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 PPT1P50897 306 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 USF2Q15853 346 aaPredicted RBP11.14□□□□□ -0.63
COLCA1-201ENST00000355430 OR10K2Q6IF99 312 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 LPCAT3Q6P1A2 487 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms