RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 NARFLQ9H6Q4 476 aa7.37□□□□□ -1.23
HTT-201ENST00000355072 APOBEC3GQ9HC16 384 aaKnown RBP7.37□□□□□ -1.23
HTT-201ENST00000355072 PARP11Q9NR21 331 aa7.37□□□□□ -1.23
HTT-201ENST00000355072 INSL6Q9Y581 213 aa7.37□□□□□ -1.23
HTT-201ENST00000355072 PCDHGA9Q9Y5G4 932 aaKnown RBP7.37□□□□□ -1.23
HTT-201ENST00000355072 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.37□□□□□ -1.23
HTT-201ENST00000355072 GTF3C1Q12789 2109 aa7.37□□□□□ -1.23
HTT-201ENST00000355072 SCN10AQ9Y5Y9 1956 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 PRAMEF27A3QJZ7 478 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 IDUAP35475 653 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 PRAMEF9Q5VWM5 478 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 REEP6Q96HR9 211 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 CCDC74BQ96LY2 380 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 CDCA3Q99618 268 aaPredicted RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 ALX4Q9H161 411 aaPredicted RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 PPP1R3DO95685 299 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 GDF5P43026 501 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 DAPP51397 102 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 SLC35G1Q2M3R5 365 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 OR8G5Q8NG78 346 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 ABHD4Q8TB40 342 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 FBXL2Q9UKC9 423 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 PHF1O43189 567 aaPredicted RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 XCR1P46094 333 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 BEX3Q00994 111 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 OR1Q1Q15612 314 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 IL22RA1Q8N6P7 574 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 CMC2Q9NRP2 79 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 TMEM189-UBE2V1I3L0A0 370 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 HPP00738 406 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 AREGP15514 252 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 CRISP2P16562 243 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 HOXA6P31267 233 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 BRS3P32247 399 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 NPBWR2P48146 333 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 PPP1CAP62136 330 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 BOLLQ8N9W6 283 aaKnown RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 GOT1L1Q8NHS2 421 aaPredicted RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 DDX31Q9H8H2 851 aaKnown RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 SAP30LQ9HAJ7 183 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 BCL2L10Q9HD36 194 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 A0A0B4J203 849 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 A0A0J9YY10 115 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 DCTN6O00399 190 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 NME1P15531 152 aaKnown RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 C18orf21Q32NC0 220 aaPredicted RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 TRMT12Q53H54 448 aaKnown RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 OR52I1Q8NGK6 324 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 FGF14Q92915 247 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 MVB12AQ96EY5 273 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 SOWAHBA6NEL2 793 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 ZNF749O43361 778 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 GABREP78334 506 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 LINC01559Q495D7 138 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 CXCL17Q6UXB2 119 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 OR5B3Q8NH48 314 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 SMOQ99835 787 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 FZD1Q9UP38 647 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 SUMO3P55854 103 aaPredicted RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 OR8B8Q15620 311 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 MRPL2Q5T653 305 aaKnown RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 ZNF626Q68DY1 528 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 SH3RF2Q8TEC5 729 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 GALMQ96C23 342 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 POU2F3Q9UKI9 436 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 GSTZ1O43708 216 aaPredicted RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 NRASP01111 189 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 HRASP01112 189 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 KRASP01116 189 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 GASTP01350 101 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 SHEQ5VZ18 495 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 TMEM183AQ8IXX5 376 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 FAM3CQ92520 227 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 KLRG1Q96E93 195 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 DCBLD2Q96PD2 775 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 FANCMQ8IYD8 2048 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 XIRP1Q702N8 1843 aaKnown RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 TOX3O15405 576 aaPredicted RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 LRP3O75074 770 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 COX6CP09669 75 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 RTP2Q5QGT7 225 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 VASNQ6EMK4 673 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 NXPE3Q969Y0 559 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 FAM210BQ96KR6 192 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 BOKQ9UMX3 212 aaPredicted RBP7.36□□□□□ -1.23
HTT-201ENST00000355072 LINC00862A6NCI5 91 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 ZAR1LA6NP61 321 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 M0QZQ0 153 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 M0R296 226 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 DEGS1O15121 323 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 PLPP2O43688 288 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 DEFA4P12838 97 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 FABP4P15090 132 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 SSTR4P31391 388 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 CDKN2DP55273 166 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 MAMDC4Q6UXC1 1216 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 SAMD7Q7Z3H4 446 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 ZNF429Q86V71 674 aa7.36□□□□□ -1.23
HTT-201ENST00000355072 NAT8Q9UHE5 227 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms