RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 SECTM1Q8WVN6 248 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 APIPQ96GX9 242 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 SYT11Q9BT88 431 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 SELENOIQ9C0D9 397 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 WNT10BO00744 389 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 CHRNB4P30926 498 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 HLA-DRB3P79483 266 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 FZD2Q14332 565 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 IL13RA2Q14627 380 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 SLC35E3Q7Z769 313 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 PCNPQ8WW12 178 aaKnown RBP11.57□□□□□ -0.56
COL6A3-203ENST00000353578 SLC35E1Q96K37 410 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 SLC2A4RGQ9NR83 387 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 HAO2Q9NYQ3 351 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 LILRB3O75022 631 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 CRYABP02511 175 aaKnown RBP11.57□□□□□ -0.56
COL6A3-203ENST00000353578 PTGFRP43088 359 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 C3orf30Q96M34 536 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 GPR34Q9UPC5 381 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 RBFOX3A6NFN3 312 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 OR8G1Q15617 311 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 TMEM65Q6PI78 240 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 WDR81Q562E7 1941 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 ALPK2Q86TB3 2170 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 SPINT2O43291 252 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 HIST1H1CP16403 213 aaKnown RBP11.57□□□□□ -0.56
COL6A3-203ENST00000353578 RPS24P62847 133 aaKnown RBP11.57□□□□□ -0.56
COL6A3-203ENST00000353578 DDA1Q9BW61 102 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 H7C1C5 153 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 ADAMTS4O75173 837 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 DMBX1Q8NFW5 382 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 PLSCR3Q9NRY6 295 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 RNF19AQ9NV58 838 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 GAGE10A6NGK3 116 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 PQBP1O60828 265 aaKnown RBP11.56□□□□□ -0.56
COL6A3-203ENST00000353578 GPM6BQ13491 265 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 LURAP1LQ8IV03 231 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 SSUH2Q9Y2M2 353 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 PEX12O00623 359 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 CD96P40200 585 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 AKR1C3P42330 323 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 XAF1Q6GPH4 301 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 LPPQ93052 612 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 UTP23Q9BRU9 249 aaKnown RBP11.56□□□□□ -0.56
COL6A3-203ENST00000353578 OR5V1Q9UGF6 321 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 SNX22Q96L94 193 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 CD52P31358 61 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 ZNF611Q8N823 705 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 CERKQ8TCT0 537 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 SH3RF2Q8TEC5 729 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 RPL10LQ96L21 214 aaKnown RBP11.56□□□□□ -0.56
COL6A3-203ENST00000353578 STACQ99469 402 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 KLF15Q9UIH9 416 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 EMP3P54852 163 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 NHLH1Q02575 133 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 MAVSQ7Z434 540 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 CELF5Q8N6W0 485 aaKnown RBP11.56□□□□□ -0.56
COL6A3-203ENST00000353578 OLIG1Q8TAK6 271 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 RXFP4Q8TDU9 374 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 MZB1Q8WU39 189 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 ROBO1Q9Y6N7 1651 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 DOPEY2Q9Y3R5 2298 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 TRAV36DV7A0A075B6V5 113 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 UNCXA6NJT0 531 aa11.56□□□□□ -0.56
COL6A3-203ENST00000353578 GLSO94925 669 aaPredicted RBP11.56□□□□□ -0.56
COL6A3-203ENST00000353578 RBM23Q86U06 439 aaKnown RBP11.56□□□□□ -0.56
COL6A3-203ENST00000353578 NLGN4YQ8NFZ3 816 aaPredicted RBP11.56□□□□□ -0.56
COL6A3-203ENST00000353578 NRLP54845 237 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 UBE2NP61088 152 aaKnown RBP11.55□□□□□ -0.56
COL6A3-203ENST00000353578 RIMKLAQ8IXN7 391 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 WDR34Q96EX3 536 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 ING1Q9UK53 422 aaPredicted RBP11.55□□□□□ -0.56
COL6A3-203ENST00000353578 COL2A1P02458 1487 aaPredicted RBP11.55□□□□□ -0.56
COL6A3-203ENST00000353578 DEGS1O15121 323 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 GALR3O60755 368 aaPredicted RBP11.55□□□□□ -0.56
COL6A3-203ENST00000353578 SPINT3P49223 89 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 HERVK_113P61574 105 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 MANEAQ5SRI9 462 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 TMEM183AQ8IXX5 376 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 PSMB10P40306 273 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 ZNF385DQ9H6B1 395 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 A0A1W2PPH5 198 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 CRYBA1P05813 215 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 EIF4EP06730 217 aaKnown RBP11.55□□□□□ -0.56
COL6A3-203ENST00000353578 CRISP2P16562 243 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 DEFB134Q4QY38 66 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 NLGN4XQ8N0W4 816 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 EGLN2Q96KS0 407 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 OR1F2PQ96R84 312 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 MTCH1Q9NZJ7 389 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 FOXJ3Q9UPW0 622 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 CEP290O15078 2479 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 DOCK2Q92608 1830 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 hCG_1809904A0A1W2PP81 198 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 A0A1W2PPE2 198 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 A0A1W2PR64 198 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 A0A1W2PRV1 198 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 DOK2O60496 412 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 CPMP14384 443 aa11.55□□□□□ -0.56
COL6A3-203ENST00000353578 RAB6CQ53S08 254 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms