RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 PPP1R2P9O14990 202 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 TCAPO15273 167 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 CSTAP01040 98 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 KNG1P01042 644 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 GNRH1P01148 92 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 GNB3P16520 340 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 ARRB1P49407 418 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 CLDN6P56747 220 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 NKX6-1P78426 367 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 SLC7A9P82251 487 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 ENPP2Q13822 863 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 ZNHIT3Q15649 155 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 ZIC1Q15915 447 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 LINC01590Q5TEZ4 76 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 MDGA2Q7Z553 956 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 ARRDC1Q8N5I2 433 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 CCDC54Q8NEL0 328 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 OR2L3Q8NG85 312 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 OR4N2Q8NGD1 307 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 OR9K2Q8NGE7 335 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 OR1J1Q8NGS3 322 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 OR13C3Q8NGS6 347 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 OR4K15Q8NH41 348 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 SMARCD2Q92925 531 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 ARRDC3Q96B67 414 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 SMIM8Q96KF7 97 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 C4orf45Q96LM5 186 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 AMELYQ99218 206 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 CNTNAP3Q9BZ76 1288 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 EGLN1Q9GZT9 426 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 DOK5Q9P104 306 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 YBX2Q9Y2T7 364 aaKnown RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 MRPS18BQ9Y676 258 aaKnown RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 COL4A3Q01955 1670 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 K7EPK0 472 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 NRG2O14511 850 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 PQBP1O60828 265 aaKnown RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 CD5P06127 495 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 PET100P0DJ07 73 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 FABP4P15090 132 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 DDTP30046 118 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 GDI1P31150 447 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 KIR3DL2P43630 455 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 SCAND1P57086 179 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 PRPS1P60891 318 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 RHEBQ15382 184 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 ALG11Q2TAA5 492 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 AKR1C8PQ5T2L2 129 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 TMEM225Q6GV28 225 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 PRSS54Q6PEW0 395 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF101Q8IZC7 436 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 PAQR4Q8N4S7 273 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 FAM71E2Q8N5Q1 922 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 SUSD6Q92537 303 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 LMLNQ96KR4 655 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 UNKLQ9H9P5 680 aaKnown RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 CRLF2Q9HC73 371 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 HCFC1R1Q9NWW0 138 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 C19orf53Q9UNZ5 99 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 WASF3Q9UPY6 502 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 TIMM10BQ9Y5J6 103 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 TMEM14AQ9Y6G1 99 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 SPACA6W5XKT8 324 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 TET1Q8NFU7 2136 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 TRBV5-7A0A0A0MS05 114 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF726A6NNF4 738 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF727A8MUV8 499 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 XKRYO14609 159 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 PHOX2AO14813 284 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 AK1P00568 194 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 SOD2P04179 222 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 FCGR3AP08637 254 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 GIMD1P0DJR0 217 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 HPGDP15428 266 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 SELPP16109 830 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 CDX1P47902 265 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-201ENST00000352993 TAS2R60P59551 318 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 C4orf17Q53FE4 359 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF550Q7Z398 422 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 MARCH3Q86UD3 253 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF595Q8IYB9 648 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 ZDHHC22Q8N966 263 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 RBM14Q96PK6 669 aaKnown RBP6.86□□□□□ -1.31
BRCA1-201ENST00000352993 NUDT9Q9BW91 350 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 GPR61Q9BZJ8 451 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 NUP210Q8TEM1 1887 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-201ENST00000352993 IGLON5A6NGN9 336 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 BRINP1O60477 761 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 MELTFP08582 738 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 QDPRP09417 244 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 HOXA5P20719 270 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 FCGR2CP31995 323 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 TAS2R31P59538 309 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 HGFACQ04756 655 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 SRSF4Q08170 494 aaKnown RBP6.86□□□□□ -1.31
BRCA1-201ENST00000352993 MLF2Q15773 248 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-201ENST00000352993 SOHLH1Q5JUK2 328 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.86□□□□□ -1.31
BRCA1-201ENST00000352993 REC114Q7Z4M0 266 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 TGIF2LXQ8IUE1 241 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms