RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 OR6C6A6NF89 314 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 A6NLC8 198 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 SSTR2P30874 369 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 ACSM1Q08AH1 577 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 SPIN3Q5JUX0 258 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 FHL5Q5TD97 284 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 GLCCI1Q86VQ1 547 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 LINC00346Q8IVM7 164 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 MRPS18AQ9NVS2 196 aaKnown RBP10.96□□□□□ -0.65
SMAD9-201ENST00000350148 GNG13Q9P2W3 67 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 SLC33A1O00400 549 aaPredicted RBP10.96□□□□□ -0.65
SMAD9-201ENST00000350148 SHOXO15266 292 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 RPS4Y1P22090 263 aaKnown RBP10.96□□□□□ -0.65
SMAD9-201ENST00000350148 OR1C1Q15619 314 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 MOB3CQ70IA8 216 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 OTOSQ8NHW6 89 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 LGALS14Q8TCE9 139 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 PLEKHJ1Q9NW61 149 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 PTTG3PQ9NZH4 202 aa10.96□□□□□ -0.65
SMAD9-201ENST00000350148 A0A1W2PNR3 127 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 ZNF850A8MQ14 1090 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 DOK2O60496 412 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 CX3CR1P49238 355 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 TMEM41BQ5BJD5 291 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 LRRC18Q8N456 261 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 OR4D11Q8NGI4 311 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 MAP6Q96JE9 813 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 FOXN4Q96NZ1 517 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 OR2M2Q96R28 347 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 OR8B4Q96RC9 309 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 RASL10BQ96S79 203 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 B4DXG7 233 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 P2RY10O00398 339 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 FBXO45P0C2W1 286 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 EFNA3P52797 238 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 IFITM3Q01628 133 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 MYBPHQ13203 477 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 RNPS1Q15287 305 aaKnown RBP10.96□□□□□ -0.66
SMAD9-201ENST00000350148 CSNK2A3Q8NEV1 391 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 ANGPTL6Q8NI99 470 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 SF3B5Q9BWJ5 86 aaKnown RBP10.96□□□□□ -0.66
SMAD9-201ENST00000350148 DNTTIP1Q9H147 329 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 LANCL2Q9NS86 450 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 C20orf141Q9NUB4 165 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 ZNF391Q9UJN7 358 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 TIMM8BQ9Y5J9 83 aaPredicted RBP10.96□□□□□ -0.66
SMAD9-201ENST00000350148 MYOFQ9NZM1 2061 aa10.96□□□□□ -0.66
SMAD9-201ENST00000350148 FAM166BA8MTA8 275 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 MKRN2OSH3BPM6 223 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 XRCC2O43543 280 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 CRYABP02511 175 aaKnown RBP10.95□□□□□ -0.66
SMAD9-201ENST00000350148 SNRNP70P08621 437 aaKnown RBP10.95□□□□□ -0.66
SMAD9-201ENST00000350148 TBC1D28Q2M2D7 210 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 OR2A2Q6IF42 318 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 SLC38A6Q8IZM9 456 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 MALSU1Q96EH3 234 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 TECTBQ96PL2 329 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 ANKRD10Q9NXR5 420 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 FLRT3Q9NZU0 649 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 MRPS28Q9Y2Q9 187 aaKnown RBP10.95□□□□□ -0.66
SMAD9-201ENST00000350148 TRAPPC2LH3BP13 241 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 ZNF17P17021 662 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 SCAND1P57086 179 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 C2orf76Q3KRA6 126 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 LAX1Q8IWV1 398 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 ARL6IP6Q8N6S5 226 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 APH1BQ8WW43 257 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 RBFOX1Q9NWB1 397 aaKnown RBP10.95□□□□□ -0.66
SMAD9-201ENST00000350148 GON4LQ3T8J9 2241 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 CHD5Q8TDI0 1954 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 PLPP3O14495 311 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 CXCL13O43927 109 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 CCR9P51686 369 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 ZNF133P52736 654 aaPredicted RBP10.95□□□□□ -0.66
SMAD9-201ENST00000350148 FAM3DQ96BQ1 224 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 TMEM59Q9BXS4 323 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 SYNPO2LQ9H987 977 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 B3GNT2Q9NY97 397 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 FOXJ3Q9UPW0 622 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 PRELID3BQ9Y3B1 194 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 A0A0A6YYH2 397 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 A6NJ64 397 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 J3QR89 54 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 AKR7A2O43488 359 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 SCGB1D2O95969 90 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 CPT2P23786 658 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 ZNF616Q08AN1 781 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 OR6V1Q8N148 313 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 ZBTB44Q8NCP5 570 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 B3GAT1Q9P2W7 334 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 GHRLQ9UBU3 117 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 PLPP2O43688 288 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 SNRPBP14678 240 aaKnown RBP10.95□□□□□ -0.66
SMAD9-201ENST00000350148 ECI1P42126 302 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 ZNF136P52737 540 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 CAV3P56539 151 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 CLDN15P56746 228 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 CTF1Q16619 201 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 KCTD9Q7L273 389 aa10.95□□□□□ -0.66
SMAD9-201ENST00000350148 C9orf40Q8IXQ3 194 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms