RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PPIHO43447 177 aaKnown RBP13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 SPRY3O43610 288 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 GPANK1O95872 356 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 TFP02787 698 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 MPV17P39210 176 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 MAGEB1P43366 347 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 ERFP50548 548 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 SLC25A1P53007 311 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 TPTEP56180 551 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 SLC3A1Q07837 685 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 MALLQ13021 153 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 CRMP1Q14194 572 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 TAF13Q15543 124 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 TSTQ16762 297 aaKnown RBP13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 HFEQ30201 348 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 SLC18B1Q6NT16 456 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 CCDC121Q6ZUS5 278 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 LINC00346Q8IVM7 164 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 OR9Q1Q8NGQ5 310 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 NRBF2Q96F24 287 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 POM121Q96HA1 1249 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 HCAR1Q9BXC0 346 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 CMC2Q9NRP2 79 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 CYB5R1Q9UHQ9 305 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 STARD10Q9Y365 291 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 ABCA1O95477 2261 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 ZFHX3Q15911 3703 aa13.47□□□□□ -0.25
TSPAN4-201ENST00000346501 TLN2Q9Y4G6 2542 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 A0A096LNT2 108 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 IGHV1-69-2A0A0G2JMI3 117 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 F5H5K5 113 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 LYNX1G3V0Z9 82 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 IGFBP1P08833 259 aaPredicted RBP13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 LYNX1P0DP58 116 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 FCGR1AP12314 374 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 OSMP13725 252 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 RAC2P15153 192 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 SELEP16581 610 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 HIST1H3AP68431 136 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 RIN1Q13671 783 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 C6orf52Q5T4I8 152 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 HIST2H3PS2Q5TEC6 136 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 FAM166AQ6J272 317 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 HIST2H3AQ71DI3 136 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 PEG10Q86TG7 708 aaKnown RBP13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 OR4Q3Q8NH05 313 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 SLC7A6Q92536 515 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 HPS1Q92902 700 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 HAVCR1Q96D42 359 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 CMBLQ96DG6 245 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 PRRG3Q9BZD7 231 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 PURGQ9UJV8 347 aaKnown RBP13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 KCNS2Q9ULS6 477 aa13.46□□□□□ -0.25
TSPAN4-201ENST00000346501 IGHV4-61A0A0C4DH41 118 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 LOC100289279A0A1B0GTE1 492 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 TVP23AA6NH52 213 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 CLDN25C9JDP6 229 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 PRR23D1E9PI22 279 aaPredicted RBP13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 CDC14BO60729 498 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 TIPRLO75663 272 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 DBHP09172 617 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 SPARCP09486 303 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 TACSTD2P09758 323 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 PRR23D2P0DMB1 279 aaPredicted RBP13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 IGHV4-31P0DP07 118 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 HOXB4P17483 251 aaPredicted RBP13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 SPI1P17947 270 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 TNFRSF1AP19438 455 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 COL8A2P25067 703 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 FASP25445 335 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 CRYBB2P43320 205 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 SLC15A1P46059 708 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 SLC6A9P48067 706 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 ENTPD1P49961 510 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 MMP15P51511 669 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 PSG7Q13046 419 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 GINS1Q14691 196 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 SHQ1Q6PI26 577 aaKnown RBP13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 USP51Q70EK9 711 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 HIPK1Q86Z02 1210 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 OR51L1Q8NGJ5 315 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 OR5K1Q8NHB7 308 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 RAB1CQ92928 201 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 RBM4Q9BWF3 364 aaKnown RBP13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 ZNF275Q9NSD4 429 aaPredicted RBP13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 ENOPH1Q9UHY7 261 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 AP4S1Q9Y587 144 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 CR1P17927 2039 aa13.45□□□□□ -0.26
TSPAN4-201ENST00000346501 LMX1BO60663 402 aa13.44□□□□□ -0.26
TSPAN4-201ENST00000346501 IGHV1-46P01743 117 aa13.44□□□□□ -0.26
TSPAN4-201ENST00000346501 LCATP04180 440 aa13.44□□□□□ -0.26
TSPAN4-201ENST00000346501 ADH4P08319 380 aa13.44□□□□□ -0.26
TSPAN4-201ENST00000346501 HNF1AP20823 631 aa13.44□□□□□ -0.26
TSPAN4-201ENST00000346501 KITLGP21583 273 aa13.44□□□□□ -0.26
TSPAN4-201ENST00000346501 PCMT1P22061 227 aa13.44□□□□□ -0.26
TSPAN4-201ENST00000346501 PRKACGP22612 351 aa13.44□□□□□ -0.26
TSPAN4-201ENST00000346501 GGT2P36268 569 aa13.44□□□□□ -0.26
TSPAN4-201ENST00000346501 TNFAIP6P98066 277 aaPredicted RBP13.44□□□□□ -0.26
TSPAN4-201ENST00000346501 KRTAP1-1Q07627 177 aa13.44□□□□□ -0.26
TSPAN4-201ENST00000346501 CHRFAM7AQ494W8 412 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms