RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 DPY19L4Q7Z388 723 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 DCXRQ7Z4W1 244 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.24□□□□□ -0.77
SNCA-202ENST00000345009 BBS1Q8NFJ9 593 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 OR5L1Q8NGL2 311 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 OR6N2Q8NGY6 317 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 ZNRF4Q8WWF5 429 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 POM121L2Q96KW2 1035 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 C4orf45Q96LM5 186 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 MBOAT4Q96T53 435 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 MYCBPQ99417 103 aaPredicted RBP10.24□□□□□ -0.77
SNCA-202ENST00000345009 CNN2Q99439 309 aaKnown RBP10.24□□□□□ -0.77
SNCA-202ENST00000345009 MNTQ99583 582 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 ATF6BQ99941 703 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 CXorf56Q9H5V9 222 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 ZNF442Q9H7R0 627 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 CA10Q9NS85 328 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 HAO2Q9NYQ3 351 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 NKX1-2Q9UD57 310 aaPredicted RBP10.24□□□□□ -0.77
SNCA-202ENST00000345009 GPR160Q9UJ42 338 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 RRP15Q9Y3B9 282 aaKnown RBP10.24□□□□□ -0.77
SNCA-202ENST00000345009 GRIP1Q9Y3R0 1128 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 CMAHPQ9Y471 501 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 FBN2P35556 2912 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 MAP1AP78559 2803 aaPredicted RBP10.23□□□□□ -0.77
SNCA-202ENST00000345009 E7EQL1 145 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 J3QW42 95 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 LCKP06239 509 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 LYNP07948 512 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 CCL2P13500 99 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 HTR1FP30939 366 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 CALCRP30988 508 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 TTKP33981 857 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 TPTEP56180 551 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 GRB2P62993 217 aaKnown RBP10.23□□□□□ -0.77
SNCA-202ENST00000345009 HGFACQ04756 655 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 SPOCK1Q08629 439 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 EIF2B1Q14232 305 aaKnown RBP10.23□□□□□ -0.77
SNCA-202ENST00000345009 OCLNQ16625 522 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 CCDC92Q53HC0 331 aaPredicted RBP10.23□□□□□ -0.77
SNCA-202ENST00000345009 OTPQ5XKR4 325 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 KRT80Q6KB66 452 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 KCTD18Q6PI47 426 aaPredicted RBP10.23□□□□□ -0.77
SNCA-202ENST00000345009 VHLLQ6RSH7 139 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 TIGD4Q8IY51 512 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 MUC15Q8N387 334 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 LILRB1Q8NHL6 650 aaPredicted RBP10.23□□□□□ -0.77
SNCA-202ENST00000345009 OTOSQ8NHW6 89 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 THEM6Q8WUY1 208 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 TMEM171Q8WVE6 324 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 ASB17Q8WXJ9 295 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 NINJ1Q92982 152 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 CCL19Q99731 98 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 COPS4Q9BT78 406 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 SP140LQ9H930 580 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 CENPMQ9NSP4 180 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 TBCCD1Q9NVR7 557 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 ST6GALNAC2Q9UJ37 374 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 LAMP5Q9UJQ1 280 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 PCDHGB1Q9Y5G3 927 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 PMF1-BGLAPU3KQ54 211 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 ARID1AO14497 2285 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 DSCAMO60469 2012 aa10.23□□□□□ -0.77
SNCA-202ENST00000345009 LOC100509620A0A075B734 347 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 A0A1W2PPR1 153 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 A6NJY4 79 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 B9A039 149 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 ZNF878C9JN71 531 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 F5H5K5 113 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 PHYHO14832 338 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 ATP6V1G2O95670 118 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 NAA10P41227 235 aaPredicted RBP10.22□□□□□ -0.77
SNCA-202ENST00000345009 HSPA13P48723 471 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 KRTAP10-9P60411 292 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 NKX6-1P78426 367 aaPredicted RBP10.22□□□□□ -0.77
SNCA-202ENST00000345009 IL5RAQ01344 420 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 DBPQ10586 325 aaPredicted RBP10.22□□□□□ -0.77
SNCA-202ENST00000345009 GGTLC2Q14390 218 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 ZNF718Q3SXZ3 478 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 RGS7BPQ6MZT1 257 aaPredicted RBP10.22□□□□□ -0.77
SNCA-202ENST00000345009 PAMR1Q6UXH9 720 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 CFAP77Q6ZQR2 320 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 CDH24Q86UP0 819 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 MYPOPQ86VE0 399 aaPredicted RBP10.22□□□□□ -0.77
SNCA-202ENST00000345009 RHOXF1Q8NHV9 184 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 NEUROG1Q92886 237 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 SLAMF6Q96DU3 332 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 ZNF582Q96NG8 517 aaPredicted RBP10.22□□□□□ -0.77
SNCA-202ENST00000345009 ADI1Q9BV57 179 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 PLK3Q9H4B4 646 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 NIPAL2Q9H841 368 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 DNAJC27Q9NZQ0 273 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 LAMP3Q9UQV4 416 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 HSPE1-MOB4S4R3N1 261 aa10.22□□□□□ -0.77
SNCA-202ENST00000345009 E9PQ18 207 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 H3BSA7 217 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 M0R129 80 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 SELENOFO60613 162 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 ICMTO60725 284 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 ENTPD6O75354 484 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms