RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SYT7O43581 403 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 UBCP0CG48 685 aaKnown RBP13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 TMEM176BQ3YBM2 270 aaPredicted RBP13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 MUC20Q8N307 709 aaPredicted RBP13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 SPICQ8N5J4 248 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 OR52N4Q8NGI2 321 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 OR6N1Q8NGY5 312 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 SLC22A8Q8TCC7 542 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 TNFAIP8L1Q8WVP5 186 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 ADAT3Q96EY9 351 aaPredicted RBP13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 SPACA5Q96QH8 159 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 POTEKPQ9BYX7 375 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 PBOV1Q9GZY1 135 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 GAREM1Q9H706 876 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 PTGES2Q9H7Z7 377 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 CNTD2Q9H8S5 307 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 SLC17A5Q9NRA2 495 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 TEX51A0A1B0GUA7 166 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 TTLL8A6PVC2 850 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 SNRPGP15A8MWD9 76 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 TPPPO94811 219 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 RAB3DO95716 219 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 TTRP02766 147 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 ISG15P05161 165 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 LPLP06858 475 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 GIPP09681 153 aaPredicted RBP13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 PNLIPP16233 465 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 GFOD2Q3B7J2 385 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 OR2M3Q8NG83 312 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 OR13C9Q8NGT0 318 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 SPACA9Q96E40 222 aaPredicted RBP13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 MED30Q96HR3 178 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 C1orf198Q9H425 327 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 C19orf25Q9UFG5 118 aaPredicted RBP13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 CYB5R1Q9UHQ9 305 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 G3V3Y1 287 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 ZNF35P13682 527 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 NAGAP17050 411 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 CXCL2P19875 107 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 LAP3P28838 519 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 H2BFSP57053 126 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 ACTBP60709 375 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 ACTG1P63261 375 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 C11orf88Q6PI97 169 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 IFI44Q8TCB0 444 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 POFUT1Q9H488 388 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 GDF2Q9UK05 429 aaPredicted RBP13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 LOC100509620A0A075B734 347 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 A0A1W2PNV4 684 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 MEGF11A6BM72 1044 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 PDGFBP01127 241 aaPredicted RBP13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 IGHG1P01857 330 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 AMY2AP04746 511 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 HSD11B1P28845 292 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 NKPD1Q17RQ9 610 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 SCGB2B2Q4G0G5 96 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 C1QTNF12Q5T7M4 302 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 IDO2Q6ZQW0 420 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 CHST4Q8NCG5 386 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 NOXO1Q8NFA2 376 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 OR4S1Q8NGB4 309 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 MAFAQ8NHW3 353 aaPredicted RBP13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 OR51E1Q8TCB6 317 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 SLX1AQ9BQ83 275 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 LHFPL6Q9Y693 200 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 FRYQ5TBA9 3013 aa13.24□□□□□ -0.29
VIPAS39-202ENST00000343765 NPIPB13A6NJU9 1138 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 NPIPB4C9JG80 1138 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 MASP2O00187 686 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 LIPCP11150 499 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 MSX1P28360 303 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 BDKRB2P30411 391 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 MMP16P51512 607 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 TAS2R19P59542 299 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 RAP2BP61225 183 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 TAF13Q15543 124 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 DMRTC1Q5HYR2 192 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 DCAF12L2Q5VW00 463 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 WDSUB1Q8N9V3 476 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 OR1J2Q8NGS2 313 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 RNF138Q8WVD3 245 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 SOX7Q9BT81 388 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 MRPL13Q9BYD1 178 aaKnown RBP13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 KLHL13Q9P2N7 655 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 ASH2LQ9UBL3 628 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 UBQLN2Q9UHD9 624 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 KLK13Q9UKR3 277 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 PATE3B3GLJ2 98 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 L7N2F9 121 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 TRAF3IP2O43734 574 aaPredicted RBP13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 CYB5AP00167 134 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 IFNA7P01567 189 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 PGA4P0DJD7 388 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 PGA3P0DJD8 388 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 GABRA1P14867 456 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 ANOS1P23352 680 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 MECP2P51608 486 aaKnown RBP13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 P2RX3P56373 397 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 OPCMLQ14982 345 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 DEGS2Q6QHC5 323 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms