RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SGK3Q96BR1 496 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 MRGPRX3Q96LB0 322 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 OBP2BQ9NPH6 170 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 DNAJB11Q9UBS4 358 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 KPTNQ9Y664 436 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 F5P12259 2224 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 ABCA3Q99758 1704 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 FAM74A7A6NL05 159 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 MCRIP1C9JLW8 97 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 PRAMEF4O60810 478 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 PTHLHP12272 177 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 ABOP16442 354 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 GCH1P30793 250 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 DCTDP32321 178 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 HAAOP46952 286 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 MCCD1P59942 119 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-202ENST00000343090 FAM74A3Q4VXF1 159 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 LAIR1Q6GTX8 287 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 GLDNQ6ZMI3 551 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-202ENST00000343090 MRPL41Q8IXM3 137 aaKnown RBP7.33□□□□□ -1.24
UBE4B-202ENST00000343090 GPR119Q8TDV5 335 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 CA5BP1Q8WTZ4 195 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 SMIM19Q96E16 107 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 NMNAT2Q9BZQ4 307 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 TUBG2Q9NRH3 451 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 C20orf141Q9NUB4 165 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 TAS2R5Q9NYW4 299 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 KLK11Q9UBX7 282 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 IFITM5A6NNB3 132 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 NUDT19A8MXV4 375 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 PTP4A3O75365 173 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 AQP8O94778 261 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 NTN1O95631 604 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 DDAH2O95865 285 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 MT-ATP6P00846 226 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 IRF2P14316 349 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 CARD18P57730 90 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 PCBD1P61457 104 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 RPL23AP62750 156 aaKnown RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 HSF1Q00613 529 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 BDH1Q02338 343 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 ACSM1Q08AH1 577 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 IAH1Q2TAA2 248 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 FCRL6Q6DN72 434 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 C5orf46Q6UWT4 87 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 PRSS41Q7RTY9 318 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 KCNRGQ8N5I3 272 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 HAS2Q92819 552 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 PIGQQ9BRB3 760 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 GPR160Q9UJ42 338 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 NXT1Q9UKK6 140 aaKnown RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 MMP17Q9ULZ9 603 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 WIF1Q9Y5W5 379 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 OTOL1A6NHN0 477 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 SCGB1D1O95968 90 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 RFC3P40938 356 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 MMP15P51511 669 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 LINC00303Q3SY05 128 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 ACTBL2Q562R1 376 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 STAC2Q6ZMT1 411 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 ZNF705AQ6ZN79 300 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 ACOT7LQ6ZUV0 252 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 CPEB2Q7Z5Q1 589 aaKnown RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 LRRTM1Q86UE6 522 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 BHLHE23Q8NDY6 225 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 FAM213BQ8TBF2 198 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 CPT1CQ8TCG5 803 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 YIPF5Q969M3 257 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 PLEKHA3Q9HB20 300 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 C1orf123Q9NWV4 160 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 CHRNA9Q9UGM1 479 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 PURGQ9UJV8 347 aaKnown RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 PCDHB10Q9UN67 800 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 NOSIPQ9Y314 301 aaKnown RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 COL4A5P29400 1685 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 OR5H14A6NHG9 310 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 CFDP00746 253 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 C1QCP02747 245 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 ZNF728P0DKX0 622 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 PI3P19957 117 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 MVDP53602 400 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 NKAIN1Q4KMZ8 207 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 C9orf50Q5SZB4 431 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 ZNF600Q6ZNG1 722 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 HIST2H3AQ71DI3 136 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 TMEM217Q8N7C4 229 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 ARIH2OSQ8N7S6 290 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 HSD17B11Q8NBQ5 300 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 RNF128Q8TEB7 428 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 FRZBQ92765 325 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 CCDC74AQ96AQ1 378 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 SCMH1Q96GD3 660 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 TMPRSS5Q9H3S3 457 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 OPA3Q9H6K4 179 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 LUZP4Q9P127 313 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 SH3BGRL2Q9UJC5 107 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 SIT1Q9Y3P8 196 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 URGCP-MRPS24S4R325 110 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 COL24A1Q17RW2 1714 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 MFSD2BA6NFX1 497 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms