RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 CCR7P32248 378 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 RAB9AP51151 201 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 ETV3LQ6ZN32 361 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 OR51H1Q8NH63 302 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 VRTNQ9H8Y1 702 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 DMAC2Q9NW81 257 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 MRPS2Q9Y399 296 aaKnown RBP16.21■□□□□ 0.19
SMAD4-201ENST00000342988 ERASQ7Z444 233 aa16.21■□□□□ 0.18
SMAD4-201ENST00000342988 FADS6Q8N9I5 356 aa16.21■□□□□ 0.18
SMAD4-201ENST00000342988 OR1N2Q8NGR9 330 aa16.21■□□□□ 0.18
SMAD4-201ENST00000342988 TMEM231Q9H6L2 316 aa16.21■□□□□ 0.18
SMAD4-201ENST00000342988 LDB3O75112 727 aa16.21■□□□□ 0.18
SMAD4-201ENST00000342988 CD80P33681 288 aa16.21■□□□□ 0.18
SMAD4-201ENST00000342988 TRMT12Q53H54 448 aaKnown RBP16.21■□□□□ 0.18
SMAD4-201ENST00000342988 LMAN1LQ9HAT1 526 aa16.21■□□□□ 0.18
SMAD4-201ENST00000342988 MT-ATP6P00846 226 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 CDKN2DP55273 166 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 PJVKQ0ZLH3 352 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 MTMR14Q8NCE2 650 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 WBP2Q969T9 261 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 MOGAT1Q96PD6 335 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 ELF4Q99607 663 aaPredicted RBP16.2■□□□□ 0.18
SMAD4-201ENST00000342988 PSENENQ9NZ42 101 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 TYROBPO43914 113 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 HAPLN1P10915 354 aaPredicted RBP16.2■□□□□ 0.18
SMAD4-201ENST00000342988 CPMP14384 443 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 B3GNT8Q7Z7M8 397 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 A6NIN4 97 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 PSMB6P28072 239 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 TNFRSF4P43489 277 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 CALHM3Q86XJ0 350 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 MYOZ3Q8TDC0 251 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 DCDP81605 110 aaKnown RBP16.2■□□□□ 0.18
SMAD4-201ENST00000342988 GPR17Q13304 367 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 IZUMO4Q1ZYL8 232 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 MRGPRX2Q96LB1 330 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 DDX60Q8IY21 1712 aaKnown RBP16.2■□□□□ 0.18
SMAD4-201ENST00000342988 MGMTP16455 207 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 FCGR2CP31995 323 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 DHRS4Q9BTZ2 278 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 FDXRP22570 491 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 EMX1Q04741 257 aaPredicted RBP16.2■□□□□ 0.18
SMAD4-201ENST00000342988 AMIGO3Q86WK7 504 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 TMEM56Q96MV1 263 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 GPR150Q8NGU9 434 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 GPR173Q9NS66 373 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 WASHC3Q9Y3C0 194 aa16.2■□□□□ 0.18
SMAD4-201ENST00000342988 SPTBN2O15020 2390 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 CLEC18AA5D8T8 446 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 POU3F3P20264 500 aaPredicted RBP16.19■□□□□ 0.18
SMAD4-201ENST00000342988 SSBP1Q04837 148 aaKnown RBP16.19■□□□□ 0.18
SMAD4-201ENST00000342988 OR4D1Q15615 310 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 MBOAT2Q6ZWT7 520 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 NRARPQ7Z6K4 114 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 DTWD1Q8N5C7 304 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 CLEC18CQ8NCF0 446 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 XYLT2Q9H1B5 865 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 P2RY12Q9H244 342 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 ROBO1Q9Y6N7 1651 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 CSF2RAP15509 400 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 TSPAN31Q12999 210 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 SPRED1Q7Z699 444 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 PTGDR2Q9Y5Y4 395 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 B2MP61769 119 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 PRDX4Q13162 271 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 RHOXF1Q8NHV9 184 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 MOB4Q9Y3A3 225 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 C1orf167Q5SNV9 1468 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 TRAV36DV7A0A075B6V5 113 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 ATP1B1P05026 303 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 CALCBP10092 127 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 SNRPGP62308 76 aaKnown RBP16.19■□□□□ 0.18
SMAD4-201ENST00000342988 C9orf135Q5VTT2 229 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 Q9Y3F1 56 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 OOEPA6NGQ2 149 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 LCN15Q6UWW0 184 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 Q6ZSR6 202 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 DOK3Q7L591 496 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 OR5D18Q8NGL1 313 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 GHSRQ92847 366 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 ZC3HAV1LQ96H79 300 aaKnown RBP16.19■□□□□ 0.18
SMAD4-201ENST00000342988 BCL3P20749 454 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 RHOBP62745 196 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 CLRN3Q8NCR9 226 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 ST8SIA4Q92187 359 aa16.19■□□□□ 0.18
SMAD4-201ENST00000342988 ZNF354AO60765 605 aaPredicted RBP16.18■□□□□ 0.18
SMAD4-201ENST00000342988 PRSS1P07477 247 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 NUDT10Q8NFP7 164 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 ABHD4Q8TB40 342 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 NUDT11Q96G61 164 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 FLVCR2Q9UPI3 526 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 PAPLNO95428 1278 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 RAF1P04049 648 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 FABP4P15090 132 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 KIR2DS2P43631 304 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 OR5M10Q6IEU7 315 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 ZNF66Q6ZN08 573 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 OLIG1Q8TAK6 271 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 MS4A10Q96PG2 267 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 SH3BP2P78314 561 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms