RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 CXorf58Q96LI9 332 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 LINC00052Q96N35 136 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 CENPMQ9NSP4 180 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 MTFP1Q9UDX5 166 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 B3GALT5Q9Y2C3 310 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 TRAV18A0A075B6X5 111 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 LOC107986453A0A1B0GWG9 222 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 A0A1W2PNR3 127 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 MEIS3P1A6NDR6 274 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 RBBP9O75884 186 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 AQP8O94778 261 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 CFIP05156 583 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 MSX1P28360 303 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 TAGLNQ01995 201 aaKnown RBP17.92■□□□□ 0.46
SPG7-202ENST00000341316 RIPPLY1Q0D2K3 151 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 HLXQ14774 488 aaPredicted RBP17.92■□□□□ 0.46
SPG7-202ENST00000341316 RBMS2Q15434 407 aaKnown RBP17.92■□□□□ 0.46
SPG7-202ENST00000341316 SLC36A1Q7Z2H8 476 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 OR2M3Q8NG83 312 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 OR4D10Q8NGI6 311 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 KLHL13Q9P2N7 655 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 MRPS18BQ9Y676 258 aaKnown RBP17.92■□□□□ 0.46
SPG7-202ENST00000341316 KCNMB2Q9Y691 235 aa17.92■□□□□ 0.46
SPG7-202ENST00000341316 FREM2Q5SZK8 3169 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 TMEM269A0A1B0GVZ9 245 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 TTLL8A6PVC2 850 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 ZNF814B7Z6K7 855 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 ARPC5O15511 151 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 TPPPO94811 219 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 FCER2P06734 321 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 FAUP35544 74 aaKnown RBP17.91■□□□□ 0.46
SPG7-202ENST00000341316 P2RY4P51582 365 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 UBE2MP61081 183 aaKnown RBP17.91■□□□□ 0.46
SPG7-202ENST00000341316 SEC61A1P61619 476 aaKnown RBP17.91■□□□□ 0.46
SPG7-202ENST00000341316 OR13C3Q8NGS6 347 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 CMKLR1Q99788 373 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 MRPL13Q9BYD1 178 aaKnown RBP17.91■□□□□ 0.46
SPG7-202ENST00000341316 FANCFQ9NPI8 374 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 OPN4Q9UHM6 478 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 ZDBF2Q9HCK1 2354 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 TNRC6BQ9UPQ9 1833 aaKnown RBP17.91■□□□□ 0.46
SPG7-202ENST00000341316 A0A1W2PNV4 684 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 UBE2QL1A1L167 161 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 MFSD2BA6NFX1 497 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 PATE3B3GLJ2 98 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 RLN1P04808 185 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 FSTP19883 344 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 EIF1AXP47813 144 aaKnown RBP17.91■□□□□ 0.46
SPG7-202ENST00000341316 H2BFSP57053 126 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 GLYATL3Q5SZD4 288 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 ALKAL2Q6UX46 152 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 WDSUB1Q8N9V3 476 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 PNPLA2Q96AD5 504 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 SPACA9Q96E40 222 aaPredicted RBP17.91■□□□□ 0.46
SPG7-202ENST00000341316 DEFB126Q9BYW3 111 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 CKLFQ9UBR5 152 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 HHLA2Q9UM44 414 aa17.91■□□□□ 0.46
SPG7-202ENST00000341316 RPH3AQ9Y2J0 694 aaPredicted RBP17.91■□□□□ 0.46
SPG7-202ENST00000341316 DCDC2BA2VCK2 349 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 POM121CA8CG34 1229 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 P2RY10O00398 339 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 ISG15P05161 165 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 CD2P06729 351 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 ZNF35P13682 527 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 KLK2P20151 261 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 ZP3P21754 424 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 S100A11P31949 105 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 SPOCK1Q08629 439 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 PCOLCEQ15113 449 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 SLC51BQ86UW2 128 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 UBALD2Q8IYN6 164 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 OR10S1Q8NGN2 331 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 COQ8AQ8NI60 647 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 SLC22A8Q8TCC7 542 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 RNF133Q8WVZ7 376 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 NAT6Q93015 286 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 GAL3ST1Q99999 423 aa17.9■□□□□ 0.46
SPG7-202ENST00000341316 CDV3Q9UKY7 258 aaKnown RBP17.9■□□□□ 0.46
SPG7-202ENST00000341316 CCDC163A0A0D9SF12 145 aa17.89■□□□□ 0.46
SPG7-202ENST00000341316 NMBP08949 121 aa17.89■□□□□ 0.46
SPG7-202ENST00000341316 CD37P11049 281 aa17.89■□□□□ 0.46
SPG7-202ENST00000341316 FGF5P12034 268 aa17.89■□□□□ 0.46
SPG7-202ENST00000341316 TDGF1P13385 188 aa17.89■□□□□ 0.46
SPG7-202ENST00000341316 HOXA6P31267 233 aa17.89■□□□□ 0.46
SPG7-202ENST00000341316 HYAL4Q2M3T9 481 aa17.89■□□□□ 0.46
SPG7-202ENST00000341316 PRAMEF20Q5VT98 475 aa17.89■□□□□ 0.46
SPG7-202ENST00000341316 RGS7BPQ6MZT1 257 aaPredicted RBP17.89■□□□□ 0.46
SPG7-202ENST00000341316 TMUB2Q71RG4 321 aa17.89■□□□□ 0.46
SPG7-202ENST00000341316 ELP5Q8TE02 316 aa17.89■□□□□ 0.46
SPG7-202ENST00000341316 EDAQ92838 391 aa17.89■□□□□ 0.46
SPG7-202ENST00000341316 ATG5Q9H1Y0 275 aa17.89■□□□□ 0.46
SPG7-202ENST00000341316 MYEF2Q9P2K5 600 aaKnown RBP17.89■□□□□ 0.46
SPG7-202ENST00000341316 C19orf25Q9UFG5 118 aaPredicted RBP17.89■□□□□ 0.46
SPG7-202ENST00000341316 CDK2AP1O14519 115 aa17.89■□□□□ 0.45
SPG7-202ENST00000341316 GOSR2O14653 212 aa17.89■□□□□ 0.45
SPG7-202ENST00000341316 RAMP1O60894 148 aa17.89■□□□□ 0.45
SPG7-202ENST00000341316 RP2O75695 350 aa17.89■□□□□ 0.45
SPG7-202ENST00000341316 HOXD4P09016 255 aaPredicted RBP17.89■□□□□ 0.45
SPG7-202ENST00000341316 H2BFMP0C1H6 154 aa17.89■□□□□ 0.45
SPG7-202ENST00000341316 HTR2CP28335 458 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms