RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 MAPRE2Q15555 327 aa13.68□□□□□ -0.22
H3F3C-201ENST00000340398 MEP1BQ16820 701 aa13.68□□□□□ -0.22
H3F3C-201ENST00000340398 HDXQ7Z353 690 aa13.68□□□□□ -0.22
H3F3C-201ENST00000340398 RCN3Q96D15 328 aa13.68□□□□□ -0.22
H3F3C-201ENST00000340398 TSSK2Q96PF2 358 aa13.68□□□□□ -0.22
H3F3C-201ENST00000340398 SSBP3Q9BWW4 388 aaPredicted RBP13.68□□□□□ -0.22
H3F3C-201ENST00000340398 WDR76Q9H967 626 aa13.68□□□□□ -0.22
H3F3C-201ENST00000340398 NMNAT1Q9HAN9 279 aaPredicted RBP13.68□□□□□ -0.22
H3F3C-201ENST00000340398 FGFR1OP2Q9NVK5 253 aa13.68□□□□□ -0.22
H3F3C-201ENST00000340398 ARMCX1Q9P291 453 aa13.68□□□□□ -0.22
H3F3C-201ENST00000340398 OR5V1Q9UGF6 321 aa13.68□□□□□ -0.22
H3F3C-201ENST00000340398 F5H5P2 479 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 CXCR6O00574 342 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 SOCS2O14508 198 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 AHCYL1O43865 530 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 KHDRBS3O75525 346 aaKnown RBP13.67□□□□□ -0.22
H3F3C-201ENST00000340398 OMGP23515 440 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 LSM6P62312 80 aaKnown RBP13.67□□□□□ -0.22
H3F3C-201ENST00000340398 LIPEQ05469 1076 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 KRR1Q13601 381 aaKnown RBP13.67□□□□□ -0.22
H3F3C-201ENST00000340398 RSPO1Q2MKA7 263 aaPredicted RBP13.67□□□□□ -0.22
H3F3C-201ENST00000340398 IFI44LQ53G44 452 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 SLC27A4Q6P1M0 643 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 LEG1Q6P5S2 330 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 CORO6Q6QEF8 472 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 PTCHD4Q6ZW05 846 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 FKBP9P1Q75LS8 142 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 CBLL1Q75N03 491 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 RRM2BQ7LG56 351 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 MOGAT3Q86VF5 341 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 KLBQ86Z14 1044 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 GLB1L2Q8IW92 636 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 PARP8Q8N3A8 854 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 FAM156AQ8NDB6 213 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 BHLHE23Q8NDY6 225 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 OR8G5Q8NG78 346 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 OR13G1Q8NGZ3 307 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 SLC7A13Q8TCU3 470 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 SLC25A28Q96A46 364 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 TMEM246Q9BRR3 403 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 NUAK2Q9H093 628 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 SIGLEC7Q9Y286 467 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 IER3IP1Q9Y5U9 82 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 TGP01266 2768 aa13.67□□□□□ -0.22
H3F3C-201ENST00000340398 DCTN6O00399 190 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 MLNRO43193 412 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 SERPINA1P01009 418 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 HLA-DPB1P04440 258 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 TROVE2P10155 538 aaKnown RBP eCLIP13.66□□□□□ -0.22
H3F3C-201ENST00000340398 RPS2P15880 293 aaKnown RBP13.66□□□□□ -0.22
H3F3C-201ENST00000340398 MDKP21741 143 aaPredicted RBP13.66□□□□□ -0.22
H3F3C-201ENST00000340398 CDKN2AP42771 156 aaKnown RBP13.66□□□□□ -0.22
H3F3C-201ENST00000340398 CENPAP49450 140 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 GNB2P62879 340 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 HOXA4Q00056 320 aaPredicted RBP13.66□□□□□ -0.22
H3F3C-201ENST00000340398 LYPD2Q6UXB3 125 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 LRRN1Q6UXK5 716 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 FBXW12Q6X9E4 464 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 MUC20Q8N307 709 aaPredicted RBP13.66□□□□□ -0.22
H3F3C-201ENST00000340398 C19orf18Q8NEA5 215 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 RAB40AQ8WXH6 277 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 HSH2DQ96JZ2 352 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 COG8Q96MW5 612 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 ZNF582Q96NG8 517 aaPredicted RBP13.66□□□□□ -0.22
H3F3C-201ENST00000340398 NRIP3Q9NQ35 241 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 VSX1Q9NZR4 365 aaPredicted RBP13.66□□□□□ -0.22
H3F3C-201ENST00000340398 LRCH1Q9Y2L9 728 aa13.66□□□□□ -0.22
H3F3C-201ENST00000340398 IGHV2-70DA0A0C4DH43 119 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 NME4O00746 187 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 GSTA4O15217 222 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 NDUFB2O95178 105 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 NCK1P16333 377 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 SDHAP31040 664 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 MTNR1AP48039 350 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 FXYD6P3P58550 94 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 IL13RA1P78552 427 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 DEFA6Q01524 100 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 SRSF4Q08170 494 aaKnown RBP13.65□□□□□ -0.22
H3F3C-201ENST00000340398 BTNL3Q6UXE8 466 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 TREML4Q6UXN2 200 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 BRD3OSQ6XYD6 125 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 NAA40Q86UY6 237 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 OR5L1Q8NGL2 311 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 DACT3Q96B18 629 aaPredicted RBP13.65□□□□□ -0.22
H3F3C-201ENST00000340398 UPRTQ96BW1 309 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 SLC30A2Q9BRI3 323 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 ZMAT3Q9HA38 289 aaKnown RBP13.65□□□□□ -0.22
H3F3C-201ENST00000340398 SRA1Q9HD15 236 aaKnown RBP13.65□□□□□ -0.22
H3F3C-201ENST00000340398 TNFRSF19Q9NS68 423 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 MIOXQ9UGB7 285 aa13.65□□□□□ -0.22
H3F3C-201ENST00000340398 KIR2DS1A0A191URI9 304 aa13.64□□□□□ -0.23
H3F3C-201ENST00000340398 POM121CA8CG34 1229 aa13.64□□□□□ -0.23
H3F3C-201ENST00000340398 CLDN34H7C241 214 aa13.64□□□□□ -0.23
H3F3C-201ENST00000340398 HOXA3O43365 443 aaPredicted RBP13.64□□□□□ -0.23
H3F3C-201ENST00000340398 SASH3O75995 380 aa13.64□□□□□ -0.23
H3F3C-201ENST00000340398 PLATP00750 562 aa13.64□□□□□ -0.23
H3F3C-201ENST00000340398 OMPP47874 163 aa13.64□□□□□ -0.23
H3F3C-201ENST00000340398 SRP9P49458 86 aaKnown RBP13.64□□□□□ -0.23
H3F3C-201ENST00000340398 HIST1H3AP68431 136 aa13.64□□□□□ -0.23
H3F3C-201ENST00000340398 SEC23BQ15437 767 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms