RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 BAP18Q8IXM2 172 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 MRPL43Q8N983 215 aaKnown RBP7.92□□□□□ -1.14
RTN3-202ENST00000339997 ISOC2Q96AB3 205 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 KCNK15Q9H427 330 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 LMAN1LQ9HAT1 526 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 C12orf10Q9HB07 376 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 ZNF346Q9UL40 294 aaKnown RBP7.92□□□□□ -1.14
RTN3-202ENST00000339997 PIGLQ9Y2B2 252 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 CREBBPQ92793 2442 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 IGLV3-10A0A075B6K4 115 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 MCRIP1C9JLW8 97 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 QDPRP09417 244 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 EPXP11678 715 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 NID1P14543 1247 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 HMGA1P17096 107 aaKnown RBP7.92□□□□□ -1.14
RTN3-202ENST00000339997 DUSP1P28562 367 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 APLNRP35414 380 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 RPS15P62841 145 aaKnown RBP7.92□□□□□ -1.14
RTN3-202ENST00000339997 TRA2BP62995 288 aaKnown RBP7.92□□□□□ -1.14
RTN3-202ENST00000339997 ZXDAP98168 799 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 FAHD1Q6P587 224 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 ETFBKMTQ8IXQ9 262 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 MFSD9Q8NBP5 474 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 OLIG1Q8TAK6 271 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 UBTD2Q8WUN7 234 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 ENKD1Q9H0I2 346 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 ENTPD2Q9Y5L3 495 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 SIPA1L1O43166 1804 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 PRRT4C9JH25 899 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 PIPP12273 146 aaPredicted RBP7.92□□□□□ -1.14
RTN3-202ENST00000339997 CPN1P15169 458 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 HOXC13P31276 330 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 GABREP78334 506 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 MFGE8Q08431 387 aaPredicted RBP7.92□□□□□ -1.14
RTN3-202ENST00000339997 ZNF425Q6IV72 752 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 BRICD5Q6PL45 260 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 TMPRSS7Q7RTY8 843 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 ABHD1Q96SE0 405 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 SCML1Q9UN30 329 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 PTPRQQ9UMZ3 2332 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 UPK1AO00322 258 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 LY86O95711 162 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 ABHD16AO95870 558 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 POU3F2P20265 443 aaPredicted RBP7.92□□□□□ -1.14
RTN3-202ENST00000339997 SNCAP37840 140 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 RIPPLY1Q0D2K3 151 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 IHHQ14623 411 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 SEZ6L2Q6UXD5 910 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 STAC2Q6ZMT1 411 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 ACOT7LQ6ZUV0 252 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 PRSS42Q7Z5A4 293 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 FBXL6Q8N531 539 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 ASB17Q8WXJ9 295 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 C8orf44Q96CB5 159 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 FAM173AQ9BQD7 235 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 NKX2-4Q9H2Z4 354 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 CMC2Q9NRP2 79 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 MED9Q9NWA0 146 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 GPR160Q9UJ42 338 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 WIF1Q9Y5W5 379 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 CBY3A6NI87 242 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 H3BMH7 237 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 GPR137BO60478 399 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 SPINK4O60575 86 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 GLSO94925 669 aaPredicted RBP7.91□□□□□ -1.14
RTN3-202ENST00000339997 ZNF205O95201 554 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 SOD1P00441 154 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 GRPP07492 148 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 IAPPP10997 89 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 EDDM3BP56851 147 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 CAMK2BQ13554 666 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 C1QTNF12Q5T7M4 302 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 LINC00696Q6ZRV3 163 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 FAM24BQ8N5W8 94 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 C20orf141Q9NUB4 165 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 UFSP2Q9NUQ7 469 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 CYB5R1Q9UHQ9 305 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 AK3Q9UIJ7 227 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 C17orf113A0A1B0GUU1 675 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 OR6C68A6NDL8 312 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 FTCDNL1E5RQL4 147 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 PPP5D1E7EU14 171 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 GFYI3L273 518 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 ANGPTL7O43827 346 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 SSSCA1O60232 199 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 LRP3O75074 770 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 MRPL33O75394 65 aaKnown RBP7.91□□□□□ -1.14
RTN3-202ENST00000339997 ZDHHC11BP0C7U3 371 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 MYF5P13349 255 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 FABP4P15090 132 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 BCKDHBP21953 392 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 SLC6A12P48065 614 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 AGFG1P52594 562 aaKnown RBP7.91□□□□□ -1.14
RTN3-202ENST00000339997 REEP5Q00765 189 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 TLE4Q04727 773 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 FXNQ16595 210 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 TCTN1Q2MV58 587 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 AAED1Q7RTV5 226 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 C17orf47Q8NEP4 570 aa7.91□□□□□ -1.14
RTN3-202ENST00000339997 SEMA6DQ8NFY4 1073 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms