RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 LAMP5Q9UJQ1 280 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 KCNK6Q9Y257 313 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 H7C1Q1 480 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 SOD2P04179 222 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 SLC2A1P11166 492 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 DDTP30046 118 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 GABRA3P34903 492 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 SNCAP37840 140 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 RAB28P51157 221 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 EIF5AP63241 154 aaKnown RBP8.44□□□□□ -1.06
NECAP1-201ENST00000339754 EGR3Q06889 387 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 IL15RAQ13261 267 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 EBPQ15125 230 aaKnown RBP8.44□□□□□ -1.06
NECAP1-201ENST00000339754 RHEBQ15382 184 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 SSX2Q16385 188 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 TMEM225Q6GV28 225 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 FDX2Q6P4F2 183 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 MTSS1LQ765P7 747 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 DPY19L4Q7Z388 723 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 CDRT4Q8N9R6 151 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 MFSD9Q8NBP5 474 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 CCDC54Q8NEL0 328 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 SLC25A43Q8WUT9 341 aaPredicted RBP8.44□□□□□ -1.06
NECAP1-201ENST00000339754 GPX7Q96SL4 187 aaPredicted RBP8.44□□□□□ -1.06
NECAP1-201ENST00000339754 STACQ99469 402 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 TMEM74BQ9NUR3 256 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 CGGBP1Q9UFW8 167 aaPredicted RBP8.44□□□□□ -1.06
NECAP1-201ENST00000339754 SLC22A13Q9Y226 551 aa8.44□□□□□ -1.06
NECAP1-201ENST00000339754 LOC390937A0A1W2PQ73 354 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 TAAR5O14804 337 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 ACRP10323 421 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 CPMP14384 443 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 CSF2RAP15509 400 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 PAX1P15863 534 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 IGFBP3P17936 291 aaPredicted RBP8.43□□□□□ -1.06
NECAP1-201ENST00000339754 HRH1P35367 487 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 LSM6P62312 80 aaKnown RBP8.43□□□□□ -1.06
NECAP1-201ENST00000339754 ID2Q02363 134 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 GAMTQ14353 236 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 TRAPPC6BQ86SZ2 158 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 FAM219AQ8IW50 185 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 SHISA5Q8N114 240 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 OR10D4PQ8NGN7 298 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 OR1J1Q8NGS3 322 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 MARCH1Q8TCQ1 289 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 PMM1Q92871 262 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 MISP3Q96FF7 219 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 OR10C1Q96KK4 312 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 ZNF558Q96NG5 402 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 TGM7Q96PF1 710 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 ZNF587Q96SQ5 575 aaPredicted RBP8.43□□□□□ -1.06
NECAP1-201ENST00000339754 C2orf88Q9BSF0 95 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 NUDT9Q9BW91 350 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 CRISPLD2Q9H0B8 497 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 AMDHD2Q9Y303 409 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 HDGFL3Q9Y3E1 203 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 FLVCR1Q9Y5Y0 555 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 COL4A6Q14031 1691 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 A0A087WUJ7 227 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 A0A1W2PRU2 124 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 GPANK1O95872 356 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 PNPP00491 289 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 CST4P01036 141 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 F13BP05160 661 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 SLC35G4P0C7Q5 338 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 HKR1P10072 659 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 RPS23P62266 143 aaKnown RBP8.43□□□□□ -1.06
NECAP1-201ENST00000339754 HSD11B2P80365 405 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 RELQ04864 619 aaPredicted RBP8.43□□□□□ -1.06
NECAP1-201ENST00000339754 RAB32Q13637 225 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 SURF2Q15527 256 aaPredicted RBP8.43□□□□□ -1.06
NECAP1-201ENST00000339754 GUK1Q16774 197 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 DNLZQ5SXM8 178 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 LRRC69Q6ZNQ3 347 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 ADGRE4PQ86SQ3 457 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 HOGA1Q86XE5 327 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 SLC39A11Q8N1S5 342 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 C19orf47Q8N9M1 422 aaKnown RBP8.43□□□□□ -1.06
NECAP1-201ENST00000339754 LRRC75AQ8NAA5 344 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 OR2L3Q8NG85 312 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 OR6N2Q8NGY6 317 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 OR2L8Q8NGY9 312 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 THRSPQ92748 146 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 IRF7Q92985 503 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 MR1Q95460 341 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 TMEM230Q96A57 120 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 ARRDC3Q96B67 414 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 S100PBPQ96BU1 408 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 TCTN2Q96GX1 697 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 CMKLR1Q99788 373 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 SSX3Q99909 188 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 DUSP15Q9H1R2 295 aaPredicted RBP8.43□□□□□ -1.06
NECAP1-201ENST00000339754 SLC26A1Q9H2B4 701 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 RAB18Q9NP72 206 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 PRR13Q9NZ81 148 aa8.43□□□□□ -1.06
NECAP1-201ENST00000339754 GDF2Q9UK05 429 aaPredicted RBP8.43□□□□□ -1.06
NECAP1-201ENST00000339754 A0A087X0M5 115 aa8.42□□□□□ -1.06
NECAP1-201ENST00000339754 A0A1B0GX30 115 aa8.42□□□□□ -1.06
NECAP1-201ENST00000339754 DCDC2BA2VCK2 349 aa8.42□□□□□ -1.06
NECAP1-201ENST00000339754 BTBD17A6NE02 478 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms