RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ZNF85Q03923 595 aa11.38□□□□□ -0.59
DFFB-202ENST00000339350 ELAVL3Q14576 367 aaKnown RBP11.38□□□□□ -0.59
DFFB-202ENST00000339350 ZNF674Q2M3X9 581 aa11.38□□□□□ -0.59
DFFB-202ENST00000339350 DEFB134Q4QY38 66 aa11.38□□□□□ -0.59
DFFB-202ENST00000339350 NCR3LG1Q68D85 454 aa11.38□□□□□ -0.59
DFFB-202ENST00000339350 TMEM64Q6YI46 380 aa11.38□□□□□ -0.59
DFFB-202ENST00000339350 BRIX1Q8TDN6 353 aaKnown RBP11.38□□□□□ -0.59
DFFB-202ENST00000339350 FCAMRQ8WWV6 532 aa11.38□□□□□ -0.59
DFFB-202ENST00000339350 SMPDL3BQ92485 455 aa11.38□□□□□ -0.59
DFFB-202ENST00000339350 KIRREL1Q96J84 757 aa11.38□□□□□ -0.59
DFFB-202ENST00000339350 OR14A2Q96R54 314 aa11.38□□□□□ -0.59
DFFB-202ENST00000339350 SELENOIQ9C0D9 397 aa11.38□□□□□ -0.59
DFFB-202ENST00000339350 KRCC1Q9NPI7 259 aaPredicted RBP11.38□□□□□ -0.59
DFFB-202ENST00000339350 CLDND1Q9NY35 253 aa11.38□□□□□ -0.59
DFFB-202ENST00000339350 ADAM29Q9UKF5 820 aa11.38□□□□□ -0.59
DFFB-202ENST00000339350 ANKRD20A5PA0PJZ0 165 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 SMCO3A2RU48 225 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 GABARAPH6UMI1 98 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 BHLHE40O14503 412 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 CCSO14618 274 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 GOSR1O95249 250 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 MBPP02686 304 aaPredicted RBP11.37□□□□□ -0.59
DFFB-202ENST00000339350 PEBP1P30086 187 aaKnown RBP11.37□□□□□ -0.59
DFFB-202ENST00000339350 MECP2P51608 486 aaKnown RBP11.37□□□□□ -0.59
DFFB-202ENST00000339350 ACSM1Q08AH1 577 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 HNF4GQ14541 408 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 MRPL2Q5T653 305 aaKnown RBP11.37□□□□□ -0.59
DFFB-202ENST00000339350 OLFML2AQ68BL7 652 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 ZNF529Q6P280 563 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 FBXO42Q6P3S6 717 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 WDR73Q6P4I2 378 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 MTSS1LQ765P7 747 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 ZNF433Q8N7K0 673 aaPredicted RBP11.37□□□□□ -0.59
DFFB-202ENST00000339350 ZNF681Q96N22 645 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 PTCHD1Q96NR3 888 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 C1QTNF2Q9BXJ5 285 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 PCBD2Q9H0N5 130 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 GSX1Q9H4S2 264 aaPredicted RBP11.37□□□□□ -0.59
DFFB-202ENST00000339350 RGCCQ9H4X1 137 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 CDRT15L2A8MXV6 281 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 MFNGO00587 321 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 HIST1H2BKO60814 126 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 ALOX12BO75342 701 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 RPLP1P05386 114 aaKnown RBP11.37□□□□□ -0.59
DFFB-202ENST00000339350 HIST1H2BJP06899 126 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 HIST1H2BOP23527 126 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 HIST1H2BBP33778 126 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 HIST1H2BDP58876 126 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 HIST1H2BCP62807 126 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 C17orf67Q0P5P2 114 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 OR1Q1Q15612 314 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 HIST2H2BEQ16778 126 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 PNLIPRP3Q17RR3 467 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 FAM78AQ5JUQ0 283 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.37□□□□□ -0.59
DFFB-202ENST00000339350 C9orf50Q5SZB4 431 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 MFSD12Q6NUT3 480 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 HEPN1Q6WQI6 88 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 ZNF610Q8N9Z0 462 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 SFXN5Q8TD22 340 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 TMEM239Q8WW34 195 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 HIST1H2BHQ93079 126 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 CDC6Q99741 560 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 HIST1H2BNQ99877 126 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 HIST1H2BMQ99879 126 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 PLEKHA1Q9HB21 404 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 COMMD9Q9P000 198 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 DEC1Q9P2X7 70 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 KCNE5Q9UJ90 142 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 GNG8Q9UK08 70 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.37□□□□□ -0.59
DFFB-202ENST00000339350 MPDZO75970 2070 aa11.37□□□□□ -0.59
DFFB-202ENST00000339350 A0A0B4J2A0 478 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 EDDM13A0A1B0GTR0 161 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 FAM171A2A8MVW0 826 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 M0QZK8 103 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 FAM157CP0CG43 387 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 PBX2P40425 430 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 LBX1P52954 281 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 ATP1B3P54709 279 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 MRPL49Q13405 166 aaKnown RBP11.36□□□□□ -0.59
DFFB-202ENST00000339350 EXOSC7Q15024 291 aaKnown RBP11.36□□□□□ -0.59
DFFB-202ENST00000339350 HIST2H3PS2Q5TEC6 136 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 C1orf53Q5VUE5 145 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 MRM1Q6IN84 353 aaKnown RBP11.36□□□□□ -0.59
DFFB-202ENST00000339350 RD3Q7Z3Z2 195 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 SUSD6Q92537 303 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 PGLYRP3Q96LB9 341 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 SHPKQ9UHJ6 478 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 TGOLN2O43493 480 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 SPARCP09486 303 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 S1PR1P21453 382 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 ID4P47928 161 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 SRSF5Q13243 272 aaKnown RBP11.36□□□□□ -0.59
DFFB-202ENST00000339350 ZNF765Q7L2R6 523 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 GID4Q8IVV7 300 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 ADPRHL1Q8NDY3 354 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 OR4K13Q8NH42 304 aa11.36□□□□□ -0.59
DFFB-202ENST00000339350 NTNG2Q96CW9 530 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms