RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 COMMD9Q9P000 198 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 TNRC6BQ9UPQ9 1833 aaKnown RBP16.84■□□□□ 0.29
PSPC1-201ENST00000338910 IGKV1D-42A0A075B6H8 117 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 OR4C45A6NMZ5 311 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 FGF16O43320 207 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 ACTL6AO96019 429 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 IFNA4P05014 189 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 TAS2R19P59542 299 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 ISXQ2M1V0 245 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 LRRC37A5PQ49AS3 106 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 ATPAF1Q5TC12 328 aaPredicted RBP16.84■□□□□ 0.29
PSPC1-201ENST00000338910 TMEM71Q6P5X7 295 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 PGAP1Q75T13 922 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 SLC16A9Q7RTY1 509 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 KMT5CQ86Y97 462 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 C1orf210Q8IVY1 113 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 C10orf53Q8N6V4 93 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 OR51A4Q8NGJ6 313 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 THAP6Q8TBB0 222 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 SFT2D1Q8WV19 159 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 DAZLQ92904 295 aaKnown RBP16.84■□□□□ 0.29
PSPC1-201ENST00000338910 CMSS1Q9BQ75 279 aaKnown RBP16.84■□□□□ 0.29
PSPC1-201ENST00000338910 KCNK15Q9H427 330 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 FBXO4Q9UKT5 387 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 CDV3Q9UKY7 258 aaKnown RBP16.84■□□□□ 0.29
PSPC1-201ENST00000338910 PATE3B3GLJ2 98 aa16.83■□□□□ 0.28
PSPC1-201ENST00000338910 BLOC1S5-TXNDC5H3BN57 136 aa16.83■□□□□ 0.28
PSPC1-201ENST00000338910 RAB3DO95716 219 aa16.83■□□□□ 0.28
PSPC1-201ENST00000338910 CASRP41180 1078 aa16.83■□□□□ 0.28
PSPC1-201ENST00000338910 KCNJ3P48549 501 aa16.83■□□□□ 0.28
PSPC1-201ENST00000338910 EBPQ15125 230 aaKnown RBP16.83■□□□□ 0.28
PSPC1-201ENST00000338910 PPP1R1CQ8WVI7 109 aa16.83■□□□□ 0.28
PSPC1-201ENST00000338910 NUP210LQ5VU65 1888 aa16.83■□□□□ 0.28
PSPC1-201ENST00000338910 IGHV3-20A0A0C4DH32 117 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 A0A1W2PQM1 296 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 SULT2B1O00204 365 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 ITGA5P08648 1049 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 IL12BP29460 328 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 ATXN7L3Q14CW9 347 aaPredicted RBP16.82■□□□□ 0.28
PSPC1-201ENST00000338910 GALNT16Q8N428 558 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 ZNF563Q8TA94 476 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 TLNRD1Q9H1K6 362 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 C4orf47A7E2U8 309 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 SMAD9O15198 467 aaKnown RBP16.82■□□□□ 0.28
PSPC1-201ENST00000338910 CDC40O60508 579 aaKnown RBP eCLIP16.82■□□□□ 0.28
PSPC1-201ENST00000338910 CRYBA1P05813 215 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 CD34P28906 385 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 ATP1B3P54709 279 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 BLOC1S1P78537 153 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 RAB12Q6IQ22 244 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 LIN54Q6MZP7 749 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 H3F3CQ6NXT2 135 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 LEG1Q6P5S2 330 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 ATG4DQ86TL0 474 aaPredicted RBP16.82■□□□□ 0.28
PSPC1-201ENST00000338910 MARCH3Q86UD3 253 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 TMEM229BQ8NBD8 167 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 SLC38A9Q8NBW4 561 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 OR1J4Q8NGS1 313 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 OR2G2Q8NGZ5 317 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 MCHR2Q969V1 340 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 ADAD1Q96M93 576 aaKnown RBP16.82■□□□□ 0.28
PSPC1-201ENST00000338910 MESP1Q9BRJ9 268 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 PDCD10Q9BUL8 212 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 EDEM2Q9BV94 578 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 TINAGL1Q9GZM7 467 aaPredicted RBP16.82■□□□□ 0.28
PSPC1-201ENST00000338910 SLC22A11Q9NSA0 550 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 COPS7AQ9UBW8 275 aa16.82■□□□□ 0.28
PSPC1-201ENST00000338910 OR6C76A6NM76 312 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 F5H0A9 414 aaPredicted RBP16.81■□□□□ 0.28
PSPC1-201ENST00000338910 CCSO14618 274 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 ZNF432O94892 652 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 CDKN2AP42771 156 aaKnown RBP16.81■□□□□ 0.28
PSPC1-201ENST00000338910 POLR2GP62487 172 aaKnown RBP eCLIP16.81■□□□□ 0.28
PSPC1-201ENST00000338910 CCL7P80098 99 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 INPP5JQ15735 1006 aaPredicted RBP16.81■□□□□ 0.28
PSPC1-201ENST00000338910 C2orf76Q3KRA6 126 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 C3orf33Q6P1S2 294 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 TMEM205Q6UW68 189 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 GPR148Q8TDV2 347 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 SEH1LQ96EE3 360 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 DNAJA3Q96EY1 480 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 SEC22AQ96IW7 307 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 MOGAT1Q96PD6 335 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 TSSK2Q96PF2 358 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 ZFP57Q9NU63 452 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 MEX3AA1L020 520 aaKnown RBP16.81■□□□□ 0.28
PSPC1-201ENST00000338910 M0QYG6 137 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 HCRTR2O43614 444 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 PNLIPP16233 465 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 SRSF3P84103 164 aaKnown RBP16.81■□□□□ 0.28
PSPC1-201ENST00000338910 AVPI1Q5T686 147 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 POMZP3Q6PJE2 187 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 OR1N1Q8NGS0 311 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 C2CD4CQ8TF44 421 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 FAM3DQ96BQ1 224 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 WWTR1Q9GZV5 400 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 SLC17A5Q9NRA2 495 aa16.81■□□□□ 0.28
PSPC1-201ENST00000338910 NOP16Q9Y3C1 178 aaKnown RBP16.81■□□□□ 0.28
PSPC1-201ENST00000338910 H3BSH0 61 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 AKR7A3O95154 331 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms