RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ABCD4O14678 606 aa12.73□□□□□ -0.37
PCDH8-201ENST00000338862 CASRP41180 1078 aa12.73□□□□□ -0.37
PCDH8-201ENST00000338862 SNRPEP62304 92 aaKnown RBP12.73□□□□□ -0.37
PCDH8-201ENST00000338862 TGIF1Q15583 401 aa12.73□□□□□ -0.37
PCDH8-201ENST00000338862 ADAM5Q6NVV9 412 aa12.73□□□□□ -0.37
PCDH8-201ENST00000338862 KCNRGQ8N5I3 272 aa12.73□□□□□ -0.37
PCDH8-201ENST00000338862 C19orf47Q8N9M1 422 aaKnown RBP12.73□□□□□ -0.37
PCDH8-201ENST00000338862 NT5CQ8TCD5 201 aa12.73□□□□□ -0.37
PCDH8-201ENST00000338862 SLC25A21Q9BQT8 299 aaPredicted RBP12.73□□□□□ -0.37
PCDH8-201ENST00000338862 MRI1Q9BV20 369 aa12.73□□□□□ -0.37
PCDH8-201ENST00000338862 MTIF3Q9H2K0 278 aaKnown RBP12.73□□□□□ -0.37
PCDH8-201ENST00000338862 GMEB2Q9UKD1 530 aa12.73□□□□□ -0.37
PCDH8-201ENST00000338862 PRELID3BQ9Y3B1 194 aa12.73□□□□□ -0.37
PCDH8-201ENST00000338862 CPED1A4D0V7 1026 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 ZNF98A6NK75 572 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 OR2A4O95047 310 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 JMJD7P0C870 316 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 ABOP16442 354 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 SERPINA2P20848 420 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 RORAP35398 523 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 ASCL1P50553 236 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 SRSF3P84103 164 aaKnown RBP12.72□□□□□ -0.37
PCDH8-201ENST00000338862 SERTAD2Q14140 314 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 PRTGQ2VWP7 1150 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 HSD17B13Q7Z5P4 300 aaPredicted RBP12.72□□□□□ -0.37
PCDH8-201ENST00000338862 RTN4RL2Q86UN3 420 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 OR52N4Q8NGI2 321 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 OR4D6Q8NGJ1 314 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 VSTM2LQ96N03 204 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 OR2A7Q96R45 310 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 BCL2L14Q9BZR8 327 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 NIT2Q9NQR4 276 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 KLRF1Q9NZS2 232 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 RPH3AQ9Y2J0 694 aaPredicted RBP12.72□□□□□ -0.37
PCDH8-201ENST00000338862 LINC01565O15544 149 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 SEMA4FO95754 770 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 FGF2P09038 288 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 RAB11FIP2Q7L804 512 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 OR6K3Q8NGY3 331 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 OR51E1Q8TCB6 317 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 VSIG4Q9Y279 399 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 MYO15AQ9UKN7 3530 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 COL4A4P53420 1690 aaPredicted RBP12.72□□□□□ -0.37
PCDH8-201ENST00000338862 LOC101059948A0A1B0GTJ6 334 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 A0A1W2PP11 408 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 RHPN2P1A8MT19 583 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 TGFBR3LH3BV60 316 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 BCL2L11O43521 198 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 ZNF254O75437 659 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 HPP00738 406 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 GABRR1P24046 479 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 PSMB6P28072 239 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 RSPO4Q2I0M5 234 aaPredicted RBP12.72□□□□□ -0.37
PCDH8-201ENST00000338862 FHL5Q5TD97 284 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 SLC36A1Q7Z2H8 476 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 OR5H2Q8NGV7 314 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 TLNRD1Q9H1K6 362 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 EHFQ9NZC4 300 aa12.72□□□□□ -0.37
PCDH8-201ENST00000338862 PHF3Q92576 2039 aaKnown RBP12.71□□□□□ -0.37
PCDH8-201ENST00000338862 TMED7-TICAM2A0A0A6YYA0 188 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 CXorf51AA0A1B0GTR3 108 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 SSX5O60225 188 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 PGCP20142 388 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 CDAP32320 146 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 PPIAP62937 165 aaKnown RBP12.71□□□□□ -0.37
PCDH8-201ENST00000338862 GAB4Q2WGN9 574 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 ETV3LQ6ZN32 361 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 CLEC1AQ8NC01 280 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 SEMA6DQ8NFY4 1073 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 OR51T1Q8NGJ9 327 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 MARVELD3Q96A59 401 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 OR8B4Q96RC9 309 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 SULT4A1Q9BR01 284 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 PIGMQ9H3S5 423 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 ZNF175Q9Y473 711 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 A8MXK9 166 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 SPP1P10451 314 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 IL11P20809 199 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 CPT2P23786 658 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 DHPSP49366 369 aaPredicted RBP12.71□□□□□ -0.37
PCDH8-201ENST00000338862 CCINQ13939 588 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 GLIPR1L1Q6UWM5 242 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 UNQ9370/PRO34162Q6UXP9 181 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 OVCH2Q7RTZ1 564 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 WDR77Q9BQA1 342 aaPredicted RBP12.71□□□□□ -0.37
PCDH8-201ENST00000338862 RSRP1Q9BUV0 290 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 BIN3Q9NQY0 253 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 PARPBPQ9NWS1 579 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 KLK13Q9UKR3 277 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 NPTNQ9Y639 398 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 PIAS3Q9Y6X2 628 aa12.71□□□□□ -0.37
PCDH8-201ENST00000338862 IGKV1D-42A0A075B6H8 117 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 TRAV20A0A0B4J274 112 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 FAM221AA4D161 298 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 PRSS37A4D1T9 235 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 LRP3O75074 770 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 NXPH3O95157 252 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 CD1CP29017 333 aa12.71□□□□□ -0.38
PCDH8-201ENST00000338862 RBMXP38159 391 aaKnown RBP12.71□□□□□ -0.38
PCDH8-201ENST00000338862 NPBWR1P48145 328 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms