RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 TSSK2Q96PF2 358 aa13.4□□□□□ -0.26
MUC1-201ENST00000337604 GPA33Q99795 319 aa13.4□□□□□ -0.26
MUC1-201ENST00000337604 NUAK2Q9H093 628 aa13.4□□□□□ -0.26
MUC1-201ENST00000337604 RERGLQ9H628 205 aa13.4□□□□□ -0.26
MUC1-201ENST00000337604 CCDC134Q9H6E4 229 aa13.4□□□□□ -0.26
MUC1-201ENST00000337604 NTN4Q9HB63 628 aa13.4□□□□□ -0.26
MUC1-201ENST00000337604 GCM1Q9NP62 436 aa13.4□□□□□ -0.26
MUC1-201ENST00000337604 PTTG3PQ9NZH4 202 aa13.4□□□□□ -0.26
MUC1-201ENST00000337604 NDUFAF4Q9P032 175 aa13.4□□□□□ -0.26
MUC1-201ENST00000337604 ATPIF1Q9UII2 106 aa13.4□□□□□ -0.26
MUC1-201ENST00000337604 NUP50Q9UKX7 468 aa13.4□□□□□ -0.26
MUC1-201ENST00000337604 AUP1Q9Y679 476 aa13.4□□□□□ -0.26
MUC1-201ENST00000337604 J3QW42 95 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 GSTA4O15217 222 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 KHDRBS3O75525 346 aaKnown RBP13.39□□□□□ -0.27
MUC1-201ENST00000337604 H1F0P07305 194 aaKnown RBP13.39□□□□□ -0.27
MUC1-201ENST00000337604 MDH2P40926 338 aaKnown RBP13.39□□□□□ -0.27
MUC1-201ENST00000337604 CDKN2AP42771 156 aaKnown RBP13.39□□□□□ -0.27
MUC1-201ENST00000337604 HIST1H3AP68431 136 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 KCNMB1Q16558 191 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 FGD3Q5JSP0 725 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 HIST2H3PS2Q5TEC6 136 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 GPR139Q6DWJ6 353 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 OR2T2Q6IF00 324 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 HIST2H3AQ71DI3 136 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 ADCK1Q86TW2 530 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 SGMS2Q8NHU3 365 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 ZNF420Q8TAQ5 688 aaPredicted RBP13.39□□□□□ -0.27
MUC1-201ENST00000337604 FAM162AQ96A26 154 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 MEGF10Q96KG7 1140 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 COG8Q96MW5 612 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 FUZQ9BT04 418 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 DDX28Q9NUL7 540 aaKnown RBP13.39□□□□□ -0.27
MUC1-201ENST00000337604 ZNF446Q9NWS9 450 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 ABCD2Q9UBJ2 740 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 PCDHGB1Q9Y5G3 927 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 IER3IP1Q9Y5U9 82 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 LHFPL6Q9Y693 200 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 DOCK11Q5JSL3 2073 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 PKD1L1Q8TDX9 2849 aa13.39□□□□□ -0.27
MUC1-201ENST00000337604 IGLV1-36A0A0B4J1U3 117 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 IGHV3-64DA0A0J9YX35 117 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 H0YL77 283 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 SURF4O15260 269 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 MLNRO43193 412 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 DIRAS1O95057 198 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 ZNF205O95201 554 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 TXNDC12O95881 172 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 HKR1P10072 659 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 PRTN3P24158 256 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 PRSS12P56730 875 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 RSPO1Q2MKA7 263 aaPredicted RBP13.38□□□□□ -0.27
MUC1-201ENST00000337604 ESCO2Q56NI9 601 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 RRM2BQ7LG56 351 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 CYP4Z1Q86W10 505 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 OR8G5Q8NG78 346 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 PTP4A1Q93096 173 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 DACT3Q96B18 629 aaPredicted RBP13.38□□□□□ -0.27
MUC1-201ENST00000337604 C7orf34Q96L11 122 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 DHRS1Q96LJ7 313 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 HOPXQ9BPY8 73 aaPredicted RBP13.38□□□□□ -0.27
MUC1-201ENST00000337604 KCTD14Q9BQ13 255 aaPredicted RBP13.38□□□□□ -0.27
MUC1-201ENST00000337604 NDEL1Q9GZM8 345 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 LRCH1Q9Y2L9 728 aa13.38□□□□□ -0.27
MUC1-201ENST00000337604 SOX21Q9Y651 276 aaPredicted RBP13.38□□□□□ -0.27
MUC1-201ENST00000337604 TMPRSS2O15393 492 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 CYB5R3P00387 301 aaPredicted RBP13.37□□□□□ -0.27
MUC1-201ENST00000337604 WNT2P09544 360 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 IGHV4-38-2P0DP08 117 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 SELEP16581 610 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 CD80P33681 288 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 RGS6P49758 472 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 NUDT2P50583 147 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 PAX8Q06710 450 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 KRTAP27-1Q3LI81 207 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 CORO6Q6QEF8 472 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 HACD2Q6Y1H2 254 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.37□□□□□ -0.27
MUC1-201ENST00000337604 ATG16L2Q8NAA4 619 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 COQ7Q99807 217 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 ZNF747Q9BV97 191 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 HDHD2Q9H0R4 259 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 WDR76Q9H967 626 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 OR5V1Q9UGF6 321 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 POLR1DQ9Y2S0 133 aa13.37□□□□□ -0.27
MUC1-201ENST00000337604 IGHV3OR16-10A0A075B7F0 116 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 A0A1B0GWJ7 208 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 UNC119BA6NIH7 251 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 IQCF6A8MYZ5 107 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 F5H5P2 479 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 PPP1R3DO95685 299 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 RHCEP18577 417 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 PMELP40967 661 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 COX10Q12887 443 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 FAM201AQ5SY85 155 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 DPY19L2P2Q6ZN68 376 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 COLCA1Q6ZS62 124 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 MUC20Q8N307 709 aaPredicted RBP13.36□□□□□ -0.27
MUC1-201ENST00000337604 BHLHE23Q8NDY6 225 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 TAF15Q92804 592 aaKnown RBP eCLIP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms