RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 BMI1P35226 326 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 MSX2P35548 267 aaPredicted RBP1.16□□□□□ -2.22
LINC00643-201ENST00000334389 ALDH3A2P51648 485 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF41P51814 821 aaPredicted RBP1.16□□□□□ -2.22
LINC00643-201ENST00000334389 ATP12AP54707 1039 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 PKNOX1P55347 436 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 FBXW4P57775 412 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 POLR2FP61218 127 aaKnown RBP1.16□□□□□ -2.22
LINC00643-201ENST00000334389 SLC25A3Q00325 362 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 RELQ04864 619 aaPredicted RBP1.16□□□□□ -2.22
LINC00643-201ENST00000334389 ASPHQ12797 758 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 BNIP1Q12981 228 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 GNA13Q14344 377 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 TOMM20Q15388 145 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 DPY19L1Q2PZI1 675 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 KLHL38Q2WGJ6 581 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 GPAT3Q53EU6 434 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 EIPR1Q53HC9 387 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 CXorf66Q5JRM2 361 aaPredicted RBP1.16□□□□□ -2.22
LINC00643-201ENST00000334389 LELP1Q5T871 98 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 NAA35Q5VZE5 725 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 SIGIRRQ6IA17 410 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 SCYL2Q6P3W7 929 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 FAM223AQ8IWN6 122 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 SLC15A3Q8IY34 581 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 MAPKAPK5-AS1Q8N8E1 139 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF491Q8N8L2 437 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 FAM47BQ8NA70 645 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 LPCAT1Q8NF37 534 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 OR8G5Q8NG78 346 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 OR7A2PQ8NGA2 310 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.16□□□□□ -2.22
LINC00643-201ENST00000334389 IFT81Q8WYA0 676 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 ARPC1AQ92747 370 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 OVOL2Q9BRP0 275 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 CENPOQ9BU64 300 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 MRPL37Q9BZE1 423 aaKnown RBP1.16□□□□□ -2.22
LINC00643-201ENST00000334389 SLC38A1Q9H2H9 487 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 EPB41L4BQ9H329 900 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 FAM96AQ9H5X1 160 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 SYNDIG1Q9H7V2 258 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 SEMA4BQ9NPR2 832 aaPredicted RBP1.16□□□□□ -2.22
LINC00643-201ENST00000334389 LZTFL1Q9NQ48 299 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 PPANQ9NQ55 473 aaKnown RBP1.16□□□□□ -2.22
LINC00643-201ENST00000334389 MIEF1Q9NQG6 463 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 KLHL1Q9NR64 748 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 ST6GALNAC1Q9NSC7 600 aaPredicted RBP1.16□□□□□ -2.22
LINC00643-201ENST00000334389 C14orf119Q9NWQ9 140 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 TAS2R9Q9NYW1 312 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 USE1Q9NZ43 259 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 SELENONQ9NZV5 590 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF229Q9UJW7 825 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 MKLN1Q9UL63 735 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 SNX12Q9UMY4 172 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 ASF1AQ9Y294 204 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 SNX10Q9Y5X0 201 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 KCNE2Q9Y6J6 123 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 COMMD3-BMI1R4GMX3 469 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 POLEQ07864 2286 aa1.16□□□□□ -2.22
LINC00643-201ENST00000334389 UQCRHLA0A096LP55 91 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 ZCWPW2A0A1B0GU75 182 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 A0A1W2PRD5 423 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 A0A1W2PRF3 423 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 A0A1W2PRM7 423 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 TRAPPC13A5PLN9 417 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 H0YJX3 145 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 H3BNH8 94 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 M0R2N4 97 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 RHBDL1O75783 438 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 NCR1O76036 304 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 KCNH1O95259 989 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 UQCRHP07919 91 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 FAM228BP0C875 321 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 SRMP19623 302 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 ZP3P21754 424 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 CPN2P22792 545 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 ZFP36P26651 326 aaKnown RBP1.15□□□□□ -2.22
LINC00643-201ENST00000334389 PSMB4P28070 264 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 SFTPDP35247 375 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 CDC42P60953 191 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 MXRA7P84157 204 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 SLC18A2Q05940 514 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 DYNC1I2Q13409 638 aaKnown RBP1.15□□□□□ -2.22
LINC00643-201ENST00000334389 SPA17Q15506 151 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 TBC1D28Q2M2D7 210 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF718Q3SXZ3 478 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 GALNTL6Q49A17 601 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 MTX3Q5HYI7 312 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 FAM27D1Q5T7N8 215 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 GKAP1Q5VSY0 366 aaPredicted RBP1.15□□□□□ -2.22
LINC00643-201ENST00000334389 KANK2Q63ZY3 851 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 STEAP3Q658P3 488 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 SPOPLQ6IQ16 392 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 LCN8Q6JVE9 175 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 C11orf87Q6NUJ2 197 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 FAM173BQ6P4H8 233 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 SLC2A7Q6PXP3 512 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 AGTRAPQ6RW13 159 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 LRRC74BQ6ZQY2 392 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 RNF144BQ7Z419 303 aa1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms