RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 FAM198BQ6UWH4 519 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 CFAP77Q6ZQR2 320 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 GPAT4Q86UL3 456 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 GABRG1Q8N1C3 465 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 FTMTQ8N4E7 242 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 OR4D6Q8NGJ1 314 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 OR8S1Q8NH09 359 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 MAFAQ8NHW3 353 aaPredicted RBP12.95□□□□□ -0.34
TPM3-206ENST00000330188 OR2A7Q96R45 310 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 WDR54Q9H977 334 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 MYEF2Q9P2K5 600 aaKnown RBP12.95□□□□□ -0.34
TPM3-206ENST00000330188 LHFPL6Q9Y693 200 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 MPC2O95563 127 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 CFIP05156 583 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 CELA2AP08217 269 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 SFTPDP35247 375 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 TSPAN5P62079 268 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 PMPCAQ10713 525 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 MFAP5Q13361 173 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 IL11RAQ14626 422 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 PRAMEF20Q5VT98 475 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 ZNF813Q6ZN06 617 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 TMEM229BQ8NBD8 167 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 PTX4Q96A99 478 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 FOXRED1Q96CU9 486 aaPredicted RBP12.94□□□□□ -0.34
TPM3-206ENST00000330188 ADAT3Q96EY9 351 aaPredicted RBP12.94□□□□□ -0.34
TPM3-206ENST00000330188 CDX2Q99626 313 aaPredicted RBP12.94□□□□□ -0.34
TPM3-206ENST00000330188 DPCDQ9BVM2 203 aaPredicted RBP12.94□□□□□ -0.34
TPM3-206ENST00000330188 GDF2Q9UK05 429 aaPredicted RBP12.94□□□□□ -0.34
TPM3-206ENST00000330188 NXT1Q9UKK6 140 aaKnown RBP12.94□□□□□ -0.34
TPM3-206ENST00000330188 A0A0A6YYH2 397 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 A6NJ64 397 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 TNFRSF10AO00220 468 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 YKT6O15498 198 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 RAMP1O60894 148 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 RLN1P04808 185 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 TDGF1P13385 188 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 KLK2P20151 261 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 BDKRB2P30411 391 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 TAS2R19P59542 299 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 DHODHQ02127 395 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 ZNF239Q16600 458 aaKnown RBP12.94□□□□□ -0.34
TPM3-206ENST00000330188 HYAL4Q2M3T9 481 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 SLC25A47Q6Q0C1 308 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 FAM109AQ8N4B1 249 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 OR1J2Q8NGS2 313 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 SLC25A43Q8WUT9 341 aaPredicted RBP12.94□□□□□ -0.34
TPM3-206ENST00000330188 EDAQ92838 391 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 WDR89Q96FK6 387 aaPredicted RBP12.94□□□□□ -0.34
TPM3-206ENST00000330188 OXGR1Q96P68 337 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 CITED4Q96RK1 184 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 PTGES2Q9H7Z7 377 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 CNTD2Q9H8S5 307 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 SEC61A2Q9H9S3 476 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 SCPEP1Q9HB40 452 aa12.94□□□□□ -0.34
TPM3-206ENST00000330188 IGHV1-45A0A0A0MS14 117 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 D6RAR5 112 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 TP53I11O14683 189 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 SYT7O43581 403 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 NOS1APO75052 506 aaPredicted RBP12.93□□□□□ -0.34
TPM3-206ENST00000330188 UMODP07911 640 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 RAB6AP20340 208 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 ADH6P28332 368 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 HSD11B1P28845 292 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 CDAP32320 146 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 RAP2BP61225 183 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 IKZF1Q13422 519 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 TMEM176BQ3YBM2 270 aaPredicted RBP12.93□□□□□ -0.34
TPM3-206ENST00000330188 CARD17Q5XLA6 110 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 OR6X1Q8NH79 312 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 CDCP1Q9H5V8 836 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 GPN3Q9UHW5 284 aaPredicted RBP12.93□□□□□ -0.34
TPM3-206ENST00000330188 HDGFL3Q9Y3E1 203 aa12.93□□□□□ -0.34
TPM3-206ENST00000330188 UBE2QL1A1L167 161 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 ZNF878C9JN71 531 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 GNALP38405 381 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 EIF1P41567 113 aaKnown RBP12.92□□□□□ -0.34
TPM3-206ENST00000330188 OR3A3P47888 321 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 CLDN6P56747 220 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 SNTA1Q13424 505 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 C2orf68Q2NKX9 166 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 HDDC2Q7Z4H3 204 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 UXS1Q8NBZ7 420 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 OR1M1Q8NGA1 313 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 OR52N4Q8NGI2 321 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 SLX1AQ9BQ83 275 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 ZMAT3Q9HA38 289 aaKnown RBP12.92□□□□□ -0.34
TPM3-206ENST00000330188 POLR1DQ9Y2S0 133 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 A0A1B0GTI1 187 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 PLSCR5A0PG75 271 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 AQP7P3A6NL99 342 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 RAB3DO95716 219 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 ITGB2P05107 769 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 MELTFP08582 738 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 ZNF43P17038 809 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 EXOSC2Q13868 293 aaKnown RBP12.92□□□□□ -0.34
TPM3-206ENST00000330188 HIST3H3Q16695 136 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 ZNF529Q6P280 563 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 OR8H3Q8N146 312 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 MUC20Q8N307 709 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms