RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 CACNA1EQ15878 2313 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 FAM25EA8MYX2 175 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 SYT7O43581 403 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 AFF3P51826 1226 aaKnown RBP15.53■□□□□ 0.08
COL9A1-201ENST00000320755 CXADRP78310 365 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 RNF144BQ7Z419 303 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 DDIT4LQ96D03 193 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 ADAT3Q96EY9 351 aaPredicted RBP15.53■□□□□ 0.08
COL9A1-201ENST00000320755 MICU1Q9BPX6 476 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 SLC17A5Q9NRA2 495 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 MEGF11A6BM72 1044 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 LGALS8O00214 317 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 SRSF10O75494 262 aaKnown RBP15.52■□□□□ 0.08
COL9A1-201ENST00000320755 PPP3CBP16298 524 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 ACHEP22303 614 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.08
COL9A1-201ENST00000320755 SFTPDP35247 375 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 DHODHQ02127 395 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 MFAP5Q13361 173 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 BEX5Q5H9J7 111 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 TMEM244Q5VVB8 128 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 TMEM65Q6PI78 240 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 ZNF574Q6ZN55 896 aaPredicted RBP15.52■□□□□ 0.08
COL9A1-201ENST00000320755 MFSD8Q8NHS3 518 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 METTL7AQ9H8H3 244 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 SDHAF2Q9NX18 166 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 UPB1Q9UBR1 384 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 NOP16Q9Y3C1 178 aaKnown RBP15.52■□□□□ 0.08
COL9A1-201ENST00000320755 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 IGHMP01871 453 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 MYBPHQ13203 477 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 GSG1LQ6UXU4 331 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 STEAP2Q8NFT2 490 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 OR10G3Q8NGC4 313 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 SOX7Q9BT81 388 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 PDCD10Q9BUL8 212 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 FSCN3Q9NQT6 498 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 SERINC1Q9NRX5 453 aa15.52■□□□□ 0.08
COL9A1-201ENST00000320755 GDF2Q9UK05 429 aaPredicted RBP15.52■□□□□ 0.08
COL9A1-201ENST00000320755 OR2J2O76002 312 aa15.52■□□□□ 0.07
COL9A1-201ENST00000320755 TPPPO94811 219 aa15.52■□□□□ 0.07
COL9A1-201ENST00000320755 ITGB2P05107 769 aa15.52■□□□□ 0.07
COL9A1-201ENST00000320755 GIMD1P0DJR0 217 aa15.52■□□□□ 0.07
COL9A1-201ENST00000320755 APOBEC1P41238 236 aaKnown RBP15.52■□□□□ 0.07
COL9A1-201ENST00000320755 ZNF41P51814 821 aaPredicted RBP15.52■□□□□ 0.07
COL9A1-201ENST00000320755 WDR45BQ5MNZ6 344 aa15.52■□□□□ 0.07
COL9A1-201ENST00000320755 ATPAF1Q5TC12 328 aaPredicted RBP15.52■□□□□ 0.07
COL9A1-201ENST00000320755 FJX1Q86VR8 437 aa15.52■□□□□ 0.07
COL9A1-201ENST00000320755 OR51E1Q8TCB6 317 aa15.52■□□□□ 0.07
COL9A1-201ENST00000320755 CCDC107Q8WV48 283 aa15.52■□□□□ 0.07
COL9A1-201ENST00000320755 ST8SIA1Q92185 356 aa15.52■□□□□ 0.07
COL9A1-201ENST00000320755 TMPRSS13Q9BYE2 586 aa15.52■□□□□ 0.07
COL9A1-201ENST00000320755 METTL21EPA6NDL7 271 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 TTRP02766 147 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 GNB3P16520 340 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 BDKRB2P30411 391 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 EMP2P54851 167 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 C3orf33Q6P1S2 294 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 TRAPPC6BQ86SZ2 158 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 BEST3Q8N1M1 668 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 TMEM229BQ8NBD8 167 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 RELL2Q8NC24 303 aaPredicted RBP15.51■□□□□ 0.07
COL9A1-201ENST00000320755 GALNT11Q8NCW6 608 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 AKIRIN1Q9H9L7 192 aaPredicted RBP15.51■□□□□ 0.07
COL9A1-201ENST00000320755 PLEKHA6Q9Y2H5 1048 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 hCG_1807616A0A1W2PRN6 198 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 HLA-AP01891 365 aaKnown RBP15.51■□□□□ 0.07
COL9A1-201ENST00000320755 NMBP08949 121 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 GABRA1P14867 456 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 PTGS2P35354 604 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 DHRS2Q13268 280 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 TAF13Q15543 124 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 CASTOR1Q8WTX7 329 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 CYYR1Q96J86 154 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 LINC00052Q96N35 136 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 OR5B2Q96R09 309 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 SELENOIQ9C0D9 397 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 PBOV1Q9GZY1 135 aa15.51■□□□□ 0.07
COL9A1-201ENST00000320755 WIPF3A6NGB9 483 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 LIPT2A6NK58 231 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 SCRG1O75711 98 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 FSTP19883 344 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 CLRN1P58418 232 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 RHBDD2Q6NTF9 364 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 MISPQ8IVT2 679 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 ZNF101Q8IZC7 436 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 PMS2P2O95744 297 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 ABOP16442 354 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 KLK2P20151 261 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 RNASE10Q5GAN6 216 aaKnown RBP15.5■□□□□ 0.07
COL9A1-201ENST00000320755 CFAP77Q6ZQR2 320 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 RHOUQ7L0Q8 258 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 ZNF546Q86UE3 836 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 TDHQ8IZJ6 230 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 NFAM1Q8NET5 270 aaPredicted RBP15.5■□□□□ 0.07
COL9A1-201ENST00000320755 RNF133Q8WVZ7 376 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 DMRTA2Q96SC8 542 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 CPAMD8Q8IZJ3 1885 aa15.5■□□□□ 0.07
COL9A1-201ENST00000320755 TMEM200CA6NKL6 621 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 HMSDA8MTL9 139 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms