RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 VDAC3Q9Y277 283 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 HEBP2Q9Y5Z4 205 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 SERINC4A6NH21 518 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 ADAM10O14672 748 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 MUC1P15941 1255 aaPredicted RBP12.79□□□□□ -0.36
PABPC1-201ENST00000318607 FHITP49789 147 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 F2RL1P55085 397 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 RAB5BP61020 215 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 ILF3Q12906 894 aaKnown RBP eCLIP12.79□□□□□ -0.36
PABPC1-201ENST00000318607 ELOCQ15369 112 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 MESTQ5EB52 335 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 RPL7L1Q6DKI1 246 aaKnown RBP12.79□□□□□ -0.36
PABPC1-201ENST00000318607 USP53Q70EK8 1073 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 ZNF550Q7Z398 422 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 C5orf34Q96MH7 638 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 NICN1Q9BSH3 213 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 SYNDIG1Q9H7V2 258 aa12.79□□□□□ -0.36
PABPC1-201ENST00000318607 PUS1Q9Y606 427 aaKnown RBP eCLIP12.79□□□□□ -0.36
PABPC1-201ENST00000318607 SCDO00767 359 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 SULT1B1O43704 296 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 SFTA3P0C7M3 94 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 TPT1P13693 172 aaKnown RBP12.78□□□□□ -0.36
PABPC1-201ENST00000318607 OR3A2P47893 321 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 CLDN6P56747 220 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 POLR2GP62487 172 aaKnown RBP eCLIP12.78□□□□□ -0.36
PABPC1-201ENST00000318607 INPP5JQ15735 1006 aaPredicted RBP12.78□□□□□ -0.36
PABPC1-201ENST00000318607 PRAMEF8Q5VWM4 474 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 PRAMEF7Q5VXH5 474 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 AWAT2Q6E213 333 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 BAP18Q8IXM2 172 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 RRNAD1Q96FB5 475 aaKnown RBP12.78□□□□□ -0.36
PABPC1-201ENST00000318607 POM121Q96HA1 1249 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 FBXO7Q9Y3I1 522 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 MMP24Q9Y5R2 645 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 NBEAQ8NFP9 2946 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 ACAA1P09110 424 aaPredicted RBP12.78□□□□□ -0.36
PABPC1-201ENST00000318607 ZNF823P16415 610 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 GJA4P35212 333 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 TMEM225Q6GV28 225 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 OR5M8Q8NGP6 311 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 TAAR8Q969N4 342 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 SLAMF9Q96A28 289 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 TSPAN32Q96QS1 320 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 RAB11FIP5Q9BXF6 653 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 MED29Q9NX70 200 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 OR5AC2Q9NZP5 309 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 GVINP1Q7Z2Y8 2422 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 FKTNO75072 461 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 SNAPINO95295 136 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 PSMB6P28072 239 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 PNLIPRP2P54317 469 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 MRPS10P82664 201 aaKnown RBP12.78□□□□□ -0.36
PABPC1-201ENST00000318607 EIF2S3LQ2VIR3 472 aaKnown RBP12.78□□□□□ -0.36
PABPC1-201ENST00000318607 NPSR1Q6W5P4 371 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 OR1M1Q8NGA1 313 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 OR13C8Q8NGS7 320 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 ADAMTS18Q8TE60 1221 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 TCEAL3Q969E4 200 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 TOMM40LQ969M1 308 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 IP6K3Q96PC2 410 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 UQCC1Q9NVA1 299 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 EMC3Q9P0I2 261 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 TNFSF18Q9UNG2 199 aa12.78□□□□□ -0.36
PABPC1-201ENST00000318607 RCL1Q9Y2P8 373 aaKnown RBP12.78□□□□□ -0.36
PABPC1-201ENST00000318607 COL4A3Q01955 1670 aa12.77□□□□□ -0.36
PABPC1-201ENST00000318607 ATXN7O15265 892 aaPredicted RBP12.77□□□□□ -0.36
PABPC1-201ENST00000318607 HLA-DOBP13765 273 aa12.77□□□□□ -0.36
PABPC1-201ENST00000318607 CTLA4P16410 223 aa12.77□□□□□ -0.36
PABPC1-201ENST00000318607 SGCAQ16586 387 aa12.77□□□□□ -0.36
PABPC1-201ENST00000318607 ZNF425Q6IV72 752 aa12.77□□□□□ -0.36
PABPC1-201ENST00000318607 SLC2A12Q8TD20 617 aa12.77□□□□□ -0.36
PABPC1-201ENST00000318607 WFIKKN2Q8TEU8 576 aa12.77□□□□□ -0.36
PABPC1-201ENST00000318607 TMPRSS13Q9BYE2 586 aa12.77□□□□□ -0.36
PABPC1-201ENST00000318607 PRTFDC1Q9NRG1 225 aa12.77□□□□□ -0.36
PABPC1-201ENST00000318607 ZFP57Q9NU63 452 aa12.77□□□□□ -0.36
PABPC1-201ENST00000318607 NDRG3Q9UGV2 375 aa12.77□□□□□ -0.36
PABPC1-201ENST00000318607 DOCK8Q8NF50 2099 aa12.77□□□□□ -0.36
PABPC1-201ENST00000318607 DOCK7Q96N67 2140 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 A0A1W2PPH5 198 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 ZNF878C9JN71 531 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 RIDAP52758 137 aaKnown RBP12.77□□□□□ -0.37
PABPC1-201ENST00000318607 FHL1Q13642 323 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 ACKR1Q16570 336 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 ZNF704Q6ZNC4 412 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-201ENST00000318607 P4HA3Q7Z4N8 544 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 DCXRQ7Z4W1 244 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 C17orf78Q8N4C9 275 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 BCORP1Q8N888 145 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 HSD17B11Q8NBQ5 300 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 APCDD1LQ8NCL9 501 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 OR5AP2Q8NGF4 316 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 C4orf45Q96LM5 186 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 DCBLD2Q96PD2 775 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 FOXQ1Q9C009 403 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 FN3KRPQ9HA64 309 aa12.77□□□□□ -0.37
PABPC1-201ENST00000318607 XRCC2O43543 280 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 ZNF354AO60765 605 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-201ENST00000318607 AQP8O94778 261 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 HCKP08631 526 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 ALOX5APP20292 161 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms