RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 JMJD7P0C870 316 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 CDK2P24941 298 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 VEGFCP49767 419 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 RASGEF1BQ0VAM2 473 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 TMEM81Q6P7N7 255 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 ST7LQ8TDW4 575 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 CT55Q8WUE5 264 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 MS4A7Q9GZW8 240 aaPredicted RBP11.05□□□□□ -0.64
RNF4-201ENST00000314289 CGGBP1Q9UFW8 167 aaPredicted RBP11.05□□□□□ -0.64
RNF4-201ENST00000314289 TCFL5Q9UL49 500 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 POLR1DQ9Y2S0 133 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 MRPS18BQ9Y676 258 aaKnown RBP11.05□□□□□ -0.64
RNF4-201ENST00000314289 A0A1W2PNU3 283 aaPredicted RBP11.05□□□□□ -0.64
RNF4-201ENST00000314289 MEIS3P1A6NDR6 274 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 A6NIZ1 184 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 P2RY10O00398 339 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 ZNF43P17038 809 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 ACP1P24666 158 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 MAPK3P27361 379 aaPredicted RBP11.05□□□□□ -0.64
RNF4-201ENST00000314289 P2RY4P51582 365 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 RAP1BP61224 184 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 RAP1AP62834 184 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 ZP4Q12836 540 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 ZMYND11Q15326 602 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 OPN5Q6U736 354 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 Q6ZTK2 550 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 PPP1R32Q7Z5V6 425 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.05□□□□□ -0.64
RNF4-201ENST00000314289 DND1Q8IYX4 353 aaKnown RBP11.05□□□□□ -0.64
RNF4-201ENST00000314289 OR52I2Q8NH67 350 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 ELMOD3Q96FG2 381 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 POTEKPQ9BYX7 375 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 PPA2Q9H2U2 334 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 TAS2R4Q9NYW5 299 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 FOXJ2Q9P0K8 574 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 FBXO4Q9UKT5 387 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 DHDHQ9UQ10 334 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 ZNF407Q9C0G0 2248 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 PHYHO14832 338 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 KHDRBS3O75525 346 aaKnown RBP11.05□□□□□ -0.64
RNF4-201ENST00000314289 RFC3P40938 356 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 PRKXP51817 358 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 SPOCK1Q08629 439 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 EXT1Q16394 746 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 RSPO4Q2I0M5 234 aaPredicted RBP11.05□□□□□ -0.64
RNF4-201ENST00000314289 TMEM255AQ5JRV8 349 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 TMEM69Q5SWH9 247 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 SLC22A10Q63ZE4 541 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 CFAP77Q6ZQR2 320 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 BTN2A1Q7KYR7 527 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 YRDCQ86U90 279 aaKnown RBP11.05□□□□□ -0.64
RNF4-201ENST00000314289 OR10H5Q8NGA6 315 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 OR1J4Q8NGS1 313 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 ASB17Q8WXJ9 295 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 RCE1Q9Y256 329 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 TRAF3IP2O43734 574 aaPredicted RBP11.04□□□□□ -0.64
RNF4-201ENST00000314289 GMDSO60547 372 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 HOXD4P09016 255 aaPredicted RBP11.04□□□□□ -0.64
RNF4-201ENST00000314289 H2BFMP0C1H6 154 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 GDNFP39905 211 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 CLDN17P56750 224 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 OPCMLQ14982 345 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 GFOD2Q3B7J2 385 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 TEX30Q5JUR7 227 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 FGD2Q7Z6J4 655 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 ESX1Q8N693 406 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 FADS6Q8N9I5 356 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 HAVCR2Q8TDQ0 301 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 ASB5Q8WWX0 329 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 SFXN2Q96NB2 322 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 MNTQ99583 582 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 SEC22CQ9BRL7 303 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 AKAP7Q9P0M2 348 aaPredicted RBP11.04□□□□□ -0.64
RNF4-201ENST00000314289 DKKL1Q9UK85 242 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 TRBV5-7A0A0A0MS05 114 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 hCG_1807616A0A1W2PRN6 198 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 OR2M5A3KFT3 312 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 G3V3Q6 166 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 KDM4BO94953 1096 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 OC90Q02509 493 aaPredicted RBP11.04□□□□□ -0.64
RNF4-201ENST00000314289 ROM1Q03395 351 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 OR10K2Q6IF99 312 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 SLC25A25Q6KCM7 469 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 DHRS13Q6UX07 377 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 HDDC2Q7Z4H3 204 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 CATSPERDQ86XM0 798 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 OR56B4Q8NH76 319 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 COQ8AQ8NI60 647 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 LHFPL5Q8TAF8 219 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 MCHR2Q969V1 340 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 CXorf58Q96LI9 332 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 SOX7Q9BT81 388 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 SDHAF2Q9NX18 166 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 COPZ2Q9P299 210 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 ASH2LQ9UBL3 628 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 MGAT4CQ9UBM8 478 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 CAMK2AQ9UQM7 478 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 NCKAP5O14513 1909 aa11.04□□□□□ -0.64
RNF4-201ENST00000314289 SPENQ96T58 3664 aaKnown RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 IGLV3-32A0A0A0MS00 114 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms