RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CD163Q86VB7 1156 aa12.41□□□□□ -0.42
MKS1-201ENST00000313863 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.41□□□□□ -0.42
MKS1-201ENST00000313863 SLC22A18ASQ8N1D0 253 aa12.41□□□□□ -0.42
MKS1-201ENST00000313863 ACBD4Q8NC06 268 aa12.41□□□□□ -0.42
MKS1-201ENST00000313863 OR4K17Q8NGC6 315 aa12.41□□□□□ -0.42
MKS1-201ENST00000313863 FAM174AQ8TBP5 190 aa12.41□□□□□ -0.42
MKS1-201ENST00000313863 UQCC2Q9BRT2 126 aa12.41□□□□□ -0.42
MKS1-201ENST00000313863 OR8D2Q9GZM6 311 aa12.41□□□□□ -0.42
MKS1-201ENST00000313863 ASF1BQ9NVP2 202 aa12.41□□□□□ -0.42
MKS1-201ENST00000313863 MLXQ9UH92 298 aa12.41□□□□□ -0.42
MKS1-201ENST00000313863 TMED7Q9Y3B3 224 aa12.41□□□□□ -0.42
MKS1-201ENST00000313863 LAMA3Q16787 3333 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 F5P12259 2224 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 TEX13DA0A0J9YY54 714 aaPredicted RBP12.4□□□□□ -0.42
MKS1-201ENST00000313863 SPTY2D1-AS1A0A0U1RR47 76 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 F8VVB4 439 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 F8VWA3 439 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 PLPP3O14495 311 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 DRD1P21728 446 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 MAOBP27338 520 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 SLC26A5P58743 744 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 MOGAT2Q3SYC2 334 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 SFTPA2Q8IWL1 248 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 SLC22A24Q8N4F4 322 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 CHST4Q8NCG5 386 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 OR51A2Q8NGJ7 313 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 OR1S2Q8NGQ3 325 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 OR6S1Q8NH40 331 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 RNF141Q8WVD5 230 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 PPP1R14AQ96A00 147 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 ADIPOR1Q96A54 375 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 FOXN4Q96NZ1 517 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 MAP3K3Q99759 626 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 RPP25Q9BUL9 199 aaKnown RBP12.4□□□□□ -0.42
MKS1-201ENST00000313863 NMES1Q9C002 83 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 IGFLR1Q9H665 355 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 CHMP1AQ9HD42 196 aaPredicted RBP12.4□□□□□ -0.42
MKS1-201ENST00000313863 G6PC2Q9NQR9 355 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 MBD2Q9UBB5 411 aa12.4□□□□□ -0.42
MKS1-201ENST00000313863 TDRD6O60522 2096 aaKnown RBP12.4□□□□□ -0.42
MKS1-201ENST00000313863 B4DGG1 531 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 NPIPB7O75200 414 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 ERCC1P07992 297 aaPredicted RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 CELA2BP08218 269 aaPredicted RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 VAMP1P23763 118 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 CAPZBP47756 277 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 SCRN3Q0VDG4 424 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 FAM189A2Q15884 450 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 ACTBL2Q562R1 376 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 BEX5Q5H9J7 111 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 C1QL3Q5VWW1 255 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 AWAT2Q6E213 333 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 RAB11FIP2Q7L804 512 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 GRINAQ7Z429 371 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 LYPD6Q86Y78 171 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 SLC30A7Q8NEW0 376 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 OR4S1Q8NGB4 309 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 NKD1Q969G9 470 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 PIK3IP1Q96FE7 263 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 GAL3ST4Q96RP7 486 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 C8orf33Q9H7E9 229 aaPredicted RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 ZMAT3Q9HA38 289 aaKnown RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 FBLN5Q9UBX5 448 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 ZMAT5Q9UDW3 170 aaKnown RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 MKI67P46013 3256 aaKnown RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 TRBV6-7A0A0A0MS04 114 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 TMEM269A0A1B0GVZ9 245 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 FITM1A5D6W6 292 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 C5orf51A6NDU8 294 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 RAB27BO00194 218 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 TO15178 435 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 PRKNO60260 465 aaPredicted RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 CRHP06850 196 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 H2BFMP0C1H6 154 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 HOXA1P49639 335 aaPredicted RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 DAP3P51398 398 aaKnown RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 CCR5P51681 352 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 ELAVL1Q15717 326 aaKnown RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 CORO6Q6QEF8 472 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 MARCH3Q86UD3 253 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 LURAP1LQ8IV03 231 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 METTL27Q8N6F8 245 aaPredicted RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 OR5AP2Q8NGF4 316 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 ZNF524Q96C55 264 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 SCGB3A2Q96PL1 93 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 SAV1Q9H4B6 383 aaPredicted RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 UCK1Q9HA47 277 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 LANCL2Q9NS86 450 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 TMEM100Q9NV29 134 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 SOHLH2Q9NX45 425 aa12.39□□□□□ -0.43
MKS1-201ENST00000313863 ZNF629Q9UEG4 869 aaPredicted RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 COA3Q9Y2R0 106 aaPredicted RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 CARHSP1Q9Y2V2 147 aaKnown RBP12.39□□□□□ -0.43
MKS1-201ENST00000313863 ALPK2Q86TB3 2170 aa12.38□□□□□ -0.43
MKS1-201ENST00000313863 CHD9Q3L8U1 2897 aa12.38□□□□□ -0.43
MKS1-201ENST00000313863 EFSO43281 561 aa12.38□□□□□ -0.43
MKS1-201ENST00000313863 TSPAN2O60636 221 aa12.38□□□□□ -0.43
MKS1-201ENST00000313863 SNAPINO95295 136 aa12.38□□□□□ -0.43
MKS1-201ENST00000313863 IGKV3-11P04433 115 aa12.38□□□□□ -0.43
MKS1-201ENST00000313863 GABRA4P48169 554 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms