RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 GIPP09681 153 aaPredicted RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 SLC35G6P0C7Q6 338 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 CALCBP10092 127 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 RRASP10301 218 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 TFPIP10646 304 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 PRG2P13727 222 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF19P17023 458 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 PSMB1P20618 241 aaKnown RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ITGA3P26006 1051 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 GIFP27352 417 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 MAPK3P27361 379 aaPredicted RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 CALCRP30988 508 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 LCN1P31025 176 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 UQCRC1P31930 480 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 APOBEC3AP31941 199 aaPredicted RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 FOLR3P41439 243 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 DIO1P49895 249 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 PSMD4P55036 377 aaKnown RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 RAP2BP61225 183 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 SNRPD2P62316 118 aaKnown RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 SIRPAP78324 504 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 BTN3A2P78410 334 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 DCDP81605 110 aaKnown RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ADORA2A-AS1P86434 159 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF85Q03923 595 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 PUDPQ08623 228 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 AIMP2Q13155 320 aaKnown RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 SNTA1Q13424 505 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF169Q14929 603 aaPredicted RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 KIR2DS3Q14952 304 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 HSPB2Q16082 182 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 DUSP5Q16690 384 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 TOR2AQ5JU69 321 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 DCST2Q5T1A1 773 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 MRPL2Q5T653 305 aaKnown RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 B3GNTL1Q67FW5 361 aaPredicted RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 C18orf63Q68DL7 685 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 FCRL6Q6DN72 434 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ARMC6Q6NXE6 501 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 LINC00696Q6ZRV3 163 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 DNM1P46Q6ZS02 220 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 KRT74Q7RTS7 529 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 OLIG3Q7RTU3 272 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 VN1R4Q7Z5H5 301 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 SLC51BQ86UW2 128 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 CXorf67Q86X51 503 aaPredicted RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 SIAH3Q8IW03 269 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 LSMEM1Q8N8F7 131 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 OR11G2Q8NGC1 345 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 OR14A16Q8NHC5 309 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 LRRC20Q8TCA0 184 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 HSD17B8Q92506 261 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 GHSRQ92847 366 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 C4orf36Q96KX1 117 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 IP6K3Q96PC2 410 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 OR2A7Q96R45 310 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 CNN2Q99439 309 aaKnown RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 SLC19A3Q9BZV2 496 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF436Q9C0F3 470 aaPredicted RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 CHRNA10Q9GZZ6 450 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 QRSL1Q9H0R6 528 aaKnown RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 PPIL3Q9H2H8 161 aaKnown RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 GPN1Q9HCN4 374 aaPredicted RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 EQTNQ9NQ60 294 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 TAS2R5Q9NYW4 299 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 GLS2Q9UI32 602 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF222Q9UK12 451 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 DAPP1Q9UN19 280 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ETV7Q9Y603 341 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 SLC22A7Q9Y694 548 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 SPACA6W5XKT8 324 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 MED12Q93074 2177 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ARID1AO14497 2285 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 CSPG4Q6UVK1 2322 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 ATRQ13535 2644 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 TRAV6A0A075B6T7 132 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 A0A0J9YY10 115 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 CENPVL1A0A0U1RR11 272 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 TCRBV16S1A1N1A0A5B0 115 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 ANKRD20A5PA0PJZ0 165 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 GXYLT2A0PJZ3 443 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 FAM183AA6NL82 134 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 VSTM2BA6NLU5 285 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 HMSDA8MTL9 139 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 C2orf74A8MZ97 194 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 E9PI62 339 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 AIPO00170 330 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 PEX12O00623 359 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 IMPA2O14732 288 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 SSNA1O43805 119 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 CTSVO60911 334 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 PRKRAO75569 313 aaKnown RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 B3GALNT1O75752 331 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 KRT33AO76009 404 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 GPR75O95800 540 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 F10P00742 488 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 MELTFP08582 738 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 TACSTD2P09758 323 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 C8orf89P0DMQ9 161 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 APEHP13798 732 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms