RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 COQ7Q99807 217 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 C1orf21Q9H246 121 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 TUBG2Q9NRH3 451 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 CYSLTR2Q9NS75 346 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 CYB5R1Q9UHQ9 305 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 GRIP1Q9Y3R0 1128 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 J3QW42 95 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 PHF1O43189 567 aaPredicted RBP16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 SRD5A1P18405 259 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 ANOS1P23352 680 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 LIPAP38571 399 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 CLEC12AQ5QGZ9 265 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 SLC35F1Q5T1Q4 408 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 PGM2L1Q6PCE3 622 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 DNM1P34Q6PK57 102 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 RASSF6Q6ZTQ3 369 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 JAZF1Q86VZ6 243 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 DHFR2Q86XF0 187 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 GJC3Q8NFK1 279 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 OR52E2Q8NGJ4 325 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 SPATA3Q8NHX4 192 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 ELMOD3Q96FG2 381 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 DCLRE1CQ96SD1 692 aaKnown RBP16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 HDHD2Q9H0R4 259 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 DECR2Q9NUI1 292 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 TMEFF2Q9UIK5 374 aaPredicted RBP16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 ZDHHC8Q9ULC8 765 aa16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 PRPF19Q9UMS4 504 aaKnown RBP16.78■□□□□ 0.28
PDZRN3-202ENST00000308537 PLSCR5A0PG75 271 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 RENP00797 406 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 MT-ND5P03915 603 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 TEKQ02763 1124 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 MVKQ03426 396 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 HLXQ14774 488 aaPredicted RBP16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 OR2T5Q6IEZ7 315 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 ARL9Q6T311 187 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 LYPD4Q6UWN0 246 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 FBXW12Q6X9E4 464 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 LINC00346Q8IVM7 164 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 ADGRG5Q8IZF4 528 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 OR10S1Q8NGN2 331 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 OR2T29Q8NH02 315 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 OR4Q3Q8NH05 313 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 ASB9Q96DX5 294 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 MAP6Q96JE9 813 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 DGCR6LQ9BY27 220 aa16.77■□□□□ 0.28
PDZRN3-202ENST00000308537 ANK2Q01484 3957 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 TIMM8AO60220 97 aaPredicted RBP16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 IGHV2-5P01817 119 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 MSMBP08118 114 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 RAC2P15153 192 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 GSTM3P21266 225 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 KRTAP24-1Q3LI83 254 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 C1orf229Q6ZS94 237 aaPredicted RBP16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 LNX2Q8N448 690 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 LINC00471Q8N535 108 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 CYB561A3Q8NBI2 242 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 AQP11Q8NBQ7 271 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 PTP4A1Q93096 173 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 POP5Q969H6 163 aaKnown RBP16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 TMEM186Q96B77 213 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 SIGLEC11Q96RL6 698 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 DIRC2Q96SL1 478 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 RBM4Q9BWF3 364 aaKnown RBP16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 NMNAT2Q9BZQ4 307 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 ZNF665Q9H7R5 613 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 G6PC2Q9NQR9 355 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 U3KQV3 271 aa16.76■□□□□ 0.27
PDZRN3-202ENST00000308537 A0A1B0GWJ7 208 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 CLDN25C9JDP6 229 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 CCNB2O95067 398 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 PYCR1P32322 319 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 SRSF2Q01130 221 aaKnown RBP16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 MICAQ29983 383 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 HFEQ30201 348 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 RPL13AP3Q6NVV1 102 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 TRPM8Q7Z2W7 1104 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 CCL17Q92583 94 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 CCDC124Q96CT7 223 aaKnown RBP16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 C1QTNF5Q9BXJ0 243 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 LPAR2Q9HBW0 351 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 HIF1ANQ9NWT6 349 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 POLR1DQ9Y2S0 133 aa16.75■□□□□ 0.27
PDZRN3-202ENST00000308537 TPD52L2O43399 206 aaKnown RBP16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 AVPP01185 164 aa16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 ACSM4P0C7M7 580 aa16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 NOS3P29474 1203 aa16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 RPS27P42677 84 aaKnown RBP16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 CENPAP49450 140 aa16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 RGS6P49758 472 aa16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 TNFAIP6P98066 277 aaPredicted RBP16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 ZMAT1Q5H9K5 638 aa16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 TMEM179BQ7Z7N9 219 aa16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 NAA40Q86UY6 237 aa16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 SLC37A3Q8NCC5 494 aa16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 APOBEC3DQ96AK3 386 aaPredicted RBP16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 SLC7A6OSQ96CW6 309 aaPredicted RBP16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 COG8Q96MW5 612 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms