RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 NTMQ9P121 344 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 ARID1AO14497 2285 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 LAMTOR5O43504 91 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 LILRB5O75023 590 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 SULT1A2P50226 295 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 MEP1BQ16820 701 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 SIGIRRQ6IA17 410 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 SH2D5Q6ZV89 423 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 CMTM4Q8IZR5 234 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 SLC39A11Q8N1S5 342 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 CYB561A3Q8NBI2 242 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 EMCNQ9ULC0 261 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 KRTDAPP60985 99 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 POLR2GP62487 172 aaKnown RBP eCLIP3.67□□□□□ -1.82
USH2A-201ENST00000307340 NKPD1Q17RQ9 610 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 CCDC190Q86UF4 302 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 FAM58AQ8N1B3 248 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 MDGA1Q8NFP4 955 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 ESAMQ96AP7 390 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 UTP23Q9BRU9 249 aaKnown RBP3.67□□□□□ -1.82
USH2A-201ENST00000307340 DAPP1Q9UN19 280 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 OC90Q02509 493 aaPredicted RBP3.67□□□□□ -1.82
USH2A-201ENST00000307340 ZNF252P-AS1Q0IIN9 211 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 MITD1Q8WV92 249 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 BANF2Q9H503 90 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 EHFQ9NZC4 300 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 MPC1Q9Y5U8 109 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 TMEM210A6NLX4 147 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 CTSVO60911 334 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 PJVKQ0ZLH3 352 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 OR7D2Q96RA2 312 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 MEIS3P2A8K0S8 358 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 C17orf105B2RV13 164 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 DVL2O14641 736 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 GPR37O15354 613 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 SNRNP200O75643 2136 aaKnown RBP3.67□□□□□ -1.82
USH2A-201ENST00000307340 MAOBP27338 520 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 DIO1P49895 249 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 MFAP5Q13361 173 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 GTF2H5Q6ZYL4 71 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 NKD1Q969G9 470 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 TMEM45BQ96B21 275 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 ESRP2Q9H6T0 727 aaKnown RBP3.67□□□□□ -1.82
USH2A-201ENST00000307340 SEBOXQ9HB31 216 aaPredicted RBP3.67□□□□□ -1.82
USH2A-201ENST00000307340 FZD3Q9NPG1 666 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 LMO7DNF2Z398 122 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 M0R143 59 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 TFPTP0C1Z6 253 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 CLN3Q13286 438 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 GRB7Q14451 532 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 FAM71E1Q6IPT2 247 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 OR2I1PQ8NGU4 316 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 CNIH3Q8TBE1 160 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 RPL10LQ96L21 214 aaKnown RBP3.67□□□□□ -1.82
USH2A-201ENST00000307340 NSUN5Q96P11 429 aaKnown RBP3.67□□□□□ -1.82
USH2A-201ENST00000307340 A8MX80 341 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 GIFP27352 417 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 ACVR1BP36896 505 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 LUMP51884 338 aaPredicted RBP3.66□□□□□ -1.82
USH2A-201ENST00000307340 CRMP1Q14194 572 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 GSG1Q2KHT4 349 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 SARAFQ96BY9 339 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 AMBNQ9NP70 447 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 CXCL10P02778 98 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 ST6GAL1P15907 406 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 PMCHP20382 165 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 SOX10P56693 466 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 SLC14A1Q13336 389 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 BPIFB2Q8N4F0 458 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 OR4D9Q8NGE8 314 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 ABHD4Q8TB40 342 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 APH1AQ96BI3 265 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 RPS10P5Q9NQ39 176 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 CDC42EP3Q9UKI2 254 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 TCRBV7S3A2A0A539 114 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 GEMIN2O14893 280 aaKnown RBP3.66□□□□□ -1.82
USH2A-201ENST00000307340 HCRTR1O43613 425 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 CEBPBP17676 345 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 ORM2P19652 201 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 KHDC3LQ587J8 217 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 OR10P1Q8NGE3 313 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 GHSRQ92847 366 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 HSD17B10Q99714 261 aaKnown RBP3.66□□□□□ -1.82
USH2A-201ENST00000307340 GKN1Q9NS71 199 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 WSB1Q9Y6I7 421 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 DOCK9Q9BZ29 2069 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 ADM5C9JUS6 153 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 G3V3Q6 166 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 AKR7A2O43488 359 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 CCR6P51684 374 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 SPATC1Q76KD6 591 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 ACY3Q96HD9 319 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 OXGR1Q96P68 337 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 ULBP2Q9BZM5 246 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 PCOLCE2Q9UKZ9 415 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 GPANK1O95872 356 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 PAQR6Q6TCH4 344 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 GLDNQ6ZMI3 551 aaPredicted RBP3.66□□□□□ -1.82
USH2A-201ENST00000307340 LYG2Q86SG7 212 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 STPG3Q8N7X2 389 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms