RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 KIR2DS4P43632 304 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 KIR2DS1Q14954 304 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 SEH1LQ96EE3 360 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 SDR39U1Q9NRG7 319 aaPredicted RBP12.3□□□□□ -0.44
TRIM56-201ENST00000306085 SRPK3Q9UPE1 567 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 NFS1Q9Y697 457 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 ZNF195O14628 629 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 DCXRQ7Z4W1 244 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 OR1L3Q8NH93 324 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 CA5BP1Q8WTZ4 195 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 RAB37Q96AX2 223 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 DLL4Q9NR61 685 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 ATP1B1P05026 303 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 OR51F2Q8NH61 342 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 OLIG1Q8TAK6 271 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 MRIQ9BWK5 157 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 MRPL37Q9BZE1 423 aaKnown RBP12.3□□□□□ -0.44
TRIM56-201ENST00000306085 A0A0G2JLL6 359 aaPredicted RBP12.3□□□□□ -0.44
TRIM56-201ENST00000306085 EPHA2P29317 976 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 PRRT2Q7Z6L0 340 aaPredicted RBP12.3□□□□□ -0.44
TRIM56-201ENST00000306085 CLEC4DQ8WXI8 215 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 M0R143 59 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 IGHV3-9P01782 118 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 RPEL1Q2QD12 228 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 PM20D1Q6GTS8 502 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 Q6ZPB1 254 aaPredicted RBP12.3□□□□□ -0.44
TRIM56-201ENST00000306085 A6NDN8 102 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 SIRPB1O00241 398 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 MTNR1BP49286 362 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 OR14A16Q8NHC5 309 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 IL22RA2Q969J5 263 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 MRPS24Q96EL2 167 aaKnown RBP12.3□□□□□ -0.44
TRIM56-201ENST00000306085 SHANK1Q9Y566 2161 aa12.3□□□□□ -0.44
TRIM56-201ENST00000306085 SERTM1A2A2V5 107 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 CYBAP13498 195 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 FOXA1P55317 472 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 OR4D10Q8NGI6 311 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 ZDHHC16Q969W1 377 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 OCEL1Q9H607 264 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 FER1L4A9Z1Z3 1794 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 PLIN4Q96Q06 1357 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 FAM87AP0C7U9 286 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 CCR7P32248 378 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 SOX18P35713 384 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 LBX2Q6XYB7 198 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 VASH2Q86V25 355 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 SLC35A4Q96G79 324 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 A0A0U1RQF3 1178 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 MYADML2A6NDP7 307 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 ICAM2P13598 275 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 EN2P19622 333 aaPredicted RBP12.29□□□□□ -0.44
TRIM56-201ENST00000306085 SPCS3P61009 180 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 PET117Q6UWS5 81 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 ARRDC2Q8TBH0 407 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 CDCP1Q9H5V8 836 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 YLPM1P49750 1951 aaKnown RBP12.29□□□□□ -0.44
TRIM56-201ENST00000306085 LINC00696Q6ZRV3 163 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 C7orf43Q8WVR3 580 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 TMEM140Q9NV12 185 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 RAF1P04049 648 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 SDC1P18827 310 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 RPL12P30050 165 aaKnown RBP12.29□□□□□ -0.44
TRIM56-201ENST00000306085 GJA4P35212 333 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 C1QTNF6Q9BXI9 259 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 SLCO1B1Q9Y6L6 691 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 F5P12259 2224 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 ZNF814B7Z6K7 855 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 OR2L13Q8N349 312 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 ANKRD10Q9NXR5 420 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 CHRM2P08172 466 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 HTN1P15515 57 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 OR52I1Q8NGK6 324 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 CRISP2P16562 243 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 MAT1AQ00266 395 aaKnown RBP12.29□□□□□ -0.44
TRIM56-201ENST00000306085 ISCA2Q86U28 154 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 OR10C1Q96KK4 312 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 UBR1Q8IWV7 1749 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 MROH2AA6NES4 1674 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 E5RGE8 158 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 ACAA2P42765 397 aaKnown RBP12.29□□□□□ -0.44
TRIM56-201ENST00000306085 HTR6P50406 440 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 Q56UQ5 140 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 WDR73Q6P4I2 378 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 CLEC14AQ86T13 490 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 CLRN3Q8NCR9 226 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 RTL8AQ9BWD3 113 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 NSG2Q9Y328 171 aa12.29□□□□□ -0.44
TRIM56-201ENST00000306085 ARFGEF2Q9Y6D5 1785 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 PVRP15151 417 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 CD70P32970 193 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 HERVK_113P61574 105 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 ZNF816Q0VGE8 651 aaPredicted RBP12.28□□□□□ -0.44
TRIM56-201ENST00000306085 SYPL1Q16563 259 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 TMEM116Q8NCL8 245 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 SLC22A13Q9Y226 551 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 FCN1O00602 326 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 ADIPOQQ15848 244 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 DCAF12Q5T6F0 453 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 RANBP10Q6VN20 620 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 TXNIPQ9H3M7 391 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms