RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TOLLIPQ9H0E2 274 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 DYNLRB1Q9NP97 96 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ACTL7AQ9Y615 435 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 URGCP-MRPS24S4R325 110 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 HSD17B6O14756 317 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 NME2P1O60361 137 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 PDGFBP01127 241 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-201ENST00000302516 DEFA4P12838 97 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 OR10A3P58181 314 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 METRNLQ641Q3 311 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 MOB1BQ7L9L4 216 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 CNEP1R1Q8N9A8 125 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 BPIFCQ8NFQ6 507 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 HSD17B8Q92506 261 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 CA14Q9ULX7 337 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 SLC5A6Q9Y289 635 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 DCTN6O00399 190 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 PLPP1O14494 284 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 SH2D1BO14796 132 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 SCRG1O75711 98 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 OR4E1P0C645 316 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 FCGR2CP31995 323 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF787Q6DD87 383 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 PGBD5Q8N414 524 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 DSCR3O14972 297 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF749O43361 778 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 ACSM4P0C7M7 580 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 CSNK1G2P78368 415 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 OR8B8Q15620 311 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 CCDC190Q86UF4 302 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 ZDHHC22Q8N966 263 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 ZBTB44Q8NCP5 570 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 OR13D1Q8NGV5 346 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 TEX37Q96LM6 180 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 TAAR6Q96RI8 345 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 NDFIP1Q9BT67 221 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 EGLN1Q9GZT9 426 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 ATG2BQ96BY7 2078 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 RFPL4AA6NLU0 287 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 RFPL4AL1F8VTS6 287 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 GFYI3L273 518 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 CLEC2LP0C7M8 214 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 TCN2P20062 427 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 ALOX5APP20292 161 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 RPL13AP40429 203 aaKnown RBP6.98□□□□□ -1.29
SF3B3-201ENST00000302516 RAD52P43351 418 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 RGRP47804 291 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 RAB13P51153 203 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 TESK1Q15569 626 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 FAM26DQ5JW98 314 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 OR8G2PQ6IF36 304 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 GLDNQ6ZMI3 551 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-201ENST00000302516 BAP18Q8IXM2 172 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 MAML2Q8IZL2 1156 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-201ENST00000302516 ST8SIA2Q92186 375 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 RALGAPA2Q2PPJ7 1873 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 SFTA3P0C7M3 94 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 SLC6A12P48065 614 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 IL10RAQ13651 578 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF573Q86YE8 665 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 LMNTD1Q8N9Z9 388 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 SLC24A4Q8NFF2 622 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 GOT1L1Q8NHS2 421 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-201ENST00000302516 VPS25Q9BRG1 176 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 OSGIN2Q9Y236 505 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 COL18A1P39060 1754 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 RP1P56715 2156 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 NPPBP16860 134 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 PPP1CBP62140 327 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 RNF151Q2KHN1 245 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 ARRDC1Q8N5I2 433 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 KCNE4Q8WWG9 221 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 NUDT22Q9BRQ3 303 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 PPT2Q9UMR5 302 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 MED16Q9Y2X0 877 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 MYADML2A6NDP7 307 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 XRCC2O43543 280 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF354AO60765 605 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-201ENST00000302516 TPBGQ13641 420 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 STK11Q15831 433 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 VRK3Q8IV63 474 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 AGBL5Q8NDL9 886 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 FOXN4Q96NZ1 517 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 SMIM7Q9BQ49 75 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 PDCD1LG2Q9BQ51 273 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 CHST2Q9Y4C5 530 aa6.98□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF727A8MUV8 499 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF732B4DXR9 585 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 YY2O15391 372 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 ARNTP27540 789 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 HRH1P35367 487 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 GZMKP49863 264 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 CLDN2P57739 230 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 CDK5R1Q15078 307 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 AFMIDQ63HM1 303 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 RNF165Q6ZSG1 346 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 GABRQQ9UN88 632 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 ST8SIA5O15466 376 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 RPL7L1Q6DKI1 246 aaKnown RBP6.97□□□□□ -1.29
SF3B3-201ENST00000302516 DOK1Q99704 481 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms