RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 LOC101059948A0A1B0GTJ6 334 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 KRT33AO76009 404 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 CTAG1AP78358 180 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 GLO1Q04760 184 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 C2orf68Q2NKX9 166 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 ZNF679Q8IYX0 411 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 SPICQ8N5J4 248 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 WDSUB1Q8N9V3 476 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 RELL2Q8NC24 303 aaPredicted RBP19.57■□□□□ 0.72
TPM4-201ENST00000300933 OR1S1Q8NH92 325 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 SYNPRQ8TBG9 265 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 FCAMRQ8WWV6 532 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 ASB10Q8WXI3 467 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 DDIT4LQ96D03 193 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 SPACA9Q96E40 222 aaPredicted RBP19.57■□□□□ 0.72
TPM4-201ENST00000300933 CENPMQ9NSP4 180 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 GLS2Q9UI32 602 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 LRP12Q9Y561 859 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 URB1O60287 2271 aaKnown RBP19.57■□□□□ 0.72
TPM4-201ENST00000300933 LIPT2A6NK58 231 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 CTDSPLO15194 276 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 DEFA5Q01523 94 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 DCXRQ7Z4W1 244 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 LRRTM1Q86UE6 522 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 MFSD8Q8NHS3 518 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 SLC39A7Q92504 469 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 JSRP1Q96MG2 331 aaPredicted RBP19.57■□□□□ 0.72
TPM4-201ENST00000300933 CHST11Q9NPF2 352 aa19.57■□□□□ 0.72
TPM4-201ENST00000300933 C19orf25Q9UFG5 118 aaPredicted RBP19.57■□□□□ 0.72
TPM4-201ENST00000300933 OR2M5A3KFT3 312 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 B3GALNT1O75752 331 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 KLF7O75840 302 aaPredicted RBP19.56■□□□□ 0.72
TPM4-201ENST00000300933 ANXA2P07355 339 aaKnown RBP19.56■□□□□ 0.72
TPM4-201ENST00000300933 BAIAP2L2Q6UXY1 529 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 GPR148Q8TDV2 347 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 GNRHR2Q96P88 292 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 EMC9Q9Y3B6 208 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 TRBV5-5A0A0J9YX44 114 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 GABRA1P14867 456 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 H2BFSP57053 126 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 GSG1LQ6UXU4 331 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 NDUFAF7Q7L592 441 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 PDZD9Q8IXQ8 264 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 SERINC1Q9NRX5 453 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 MED9Q9NWA0 146 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 MYEF2Q9P2K5 600 aaKnown RBP19.56■□□□□ 0.72
TPM4-201ENST00000300933 B3GALT1Q9Y5Z6 326 aa19.56■□□□□ 0.72
TPM4-201ENST00000300933 GABARAPH6UMI1 98 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 ECDO95905 644 aaPredicted RBP19.55■□□□□ 0.72
TPM4-201ENST00000300933 GK2Q14410 553 aaPredicted RBP19.55■□□□□ 0.72
TPM4-201ENST00000300933 IL11RAQ14626 422 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 ZNF169Q14929 603 aaPredicted RBP19.55■□□□□ 0.72
TPM4-201ENST00000300933 TMEM176BQ3YBM2 270 aaPredicted RBP19.55■□□□□ 0.72
TPM4-201ENST00000300933 SHEQ5VZ18 495 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 ZNF626Q68DY1 528 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 PLPP7Q8NBV4 271 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 SLITRK2Q9H156 845 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 SLC26A1Q9H2B4 701 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 FAM74A7A6NL05 159 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 TMEM212A6NML5 194 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 NTN3O00634 580 aaPredicted RBP19.55■□□□□ 0.72
TPM4-201ENST00000300933 LMX1BO60663 402 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 CPN1P15169 458 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 AP3S2P59780 193 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 MFAP5Q13361 173 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 FAM74A3Q4VXF1 159 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 ASPHD2Q6ICH7 369 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 TMEM105Q8N8V8 129 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 SLC22A8Q8TCC7 542 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 ELP5Q8TE02 316 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 GPN1Q9HCN4 374 aaPredicted RBP19.55■□□□□ 0.72
TPM4-201ENST00000300933 AKAP7Q9P0M2 348 aaPredicted RBP19.55■□□□□ 0.72
TPM4-201ENST00000300933 HS3ST3B1Q9Y662 390 aa19.55■□□□□ 0.72
TPM4-201ENST00000300933 CHCHD2Q9Y6H1 151 aaPredicted RBP19.55■□□□□ 0.72
TPM4-201ENST00000300933 ZNF35P13682 527 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 ZNF823P16415 610 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 OR2M3Q8NG83 312 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 ZNF275Q9NSD4 429 aaPredicted RBP19.54■□□□□ 0.72
TPM4-201ENST00000300933 SLC39A1Q9NY26 324 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 B3GAT1Q9P2W7 334 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 OR6C65A6NJZ3 312 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 PYCARD-AS1I3L0S3 204 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 ZNF254O75437 659 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 OR2A4O95047 310 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 CER1O95813 267 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 PPP3CBP16298 524 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 CDK2P24941 298 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 CDAP32320 146 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 EFNB2P52799 333 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 TMEM69Q5SWH9 247 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 SLC26A10Q8NG04 563 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 OR4K17Q8NGC6 315 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 OR51D1Q8NGF3 324 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 MRPS24Q96EL2 167 aaKnown RBP19.54■□□□□ 0.72
TPM4-201ENST00000300933 OR2A7Q96R45 310 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 KCNK17Q96T54 332 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 ZNF160Q9HCG1 818 aa19.54■□□□□ 0.72
TPM4-201ENST00000300933 IGHV1-45A0A0A0MS14 117 aa19.53■□□□□ 0.72
TPM4-201ENST00000300933 CRABP1P29762 137 aa19.53■□□□□ 0.72
TPM4-201ENST00000300933 ZFP36L1Q07352 338 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms