RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 MISPQ8IVT2 679 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 DEFB123Q8N688 67 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 ZBTB8AQ96BR9 441 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 PIK3IP1Q96FE7 263 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 MRGPRX1Q96LB2 322 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 SLC46A1Q96NT5 459 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 TSSK2Q96PF2 358 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 KNTC1P50748 2209 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 ASXL3Q9C0F0 2248 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 MPDZO75970 2070 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 MEGF11A6BM72 1044 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 COLCA2A8K830 154 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 F8VVB4 439 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 F8VWA3 439 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 OIP5O43482 229 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 SRSF10O75494 262 aaKnown RBP9.32□□□□□ -0.92
SKA1-201ENST00000285116 S100A6P06703 90 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 RAB6AP20340 208 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 PTAFRP25105 342 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 GABRA4P48169 554 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 MRPS21P82921 87 aaKnown RBP9.32□□□□□ -0.92
SKA1-201ENST00000285116 NAAAQ02083 359 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 NKAPLQ5M9Q1 402 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 ASPHD2Q6ICH7 369 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 SLC30A7Q8NEW0 376 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 OR51D1Q8NGF3 324 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 OR4A4PQ8NGN8 299 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 OR6N2Q8NGY6 317 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 OR10AC1Q8NH08 325 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 C8orf44Q96CB5 159 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 TCTN2Q96GX1 697 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 SEC22AQ96IW7 307 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 SEBOXQ9HB31 216 aaPredicted RBP9.32□□□□□ -0.92
SKA1-201ENST00000285116 IKZF2Q9UKS7 526 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 TRAV36DV7A0A075B6V5 113 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 A0A0A6YYC8 382 aaPredicted RBP9.31□□□□□ -0.92
SKA1-201ENST00000285116 FITM1A5D6W6 292 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 C4orf47A7E2U8 309 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 FAM171A2A8MVW0 826 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 C1orf196B1AJZ1 125 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 H0YIG0 161 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 I3L1I5 382 aaPredicted RBP9.31□□□□□ -0.92
SKA1-201ENST00000285116 SCDO00767 359 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 AMY2AP04746 511 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 ISG15P05161 165 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 ZNF735P0CB33 412 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 PJVKQ0ZLH3 352 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 C1orf100Q5SVJ3 147 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 PRAMEF17Q5VTA0 474 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 ARMC6Q6NXE6 501 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 UNQ6126/PRO20091Q6UXV3 157 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 Q6ZSR6 202 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 CATSPERDQ86XM0 798 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 LYPD6Q86Y78 171 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 AVL9Q8NBF6 648 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 RLN3Q8WXF3 142 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 INTS12Q96CB8 462 aaKnown RBP9.31□□□□□ -0.92
SKA1-201ENST00000285116 SEH1LQ96EE3 360 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 SLC41A2Q96JW4 573 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 ZNF587Q96SQ5 575 aaPredicted RBP9.31□□□□□ -0.92
SKA1-201ENST00000285116 NUDT16L1Q9BRJ7 211 aaKnown RBP9.31□□□□□ -0.92
SKA1-201ENST00000285116 GPR174Q9BXC1 333 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 EGLN1Q9GZT9 426 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 CAPN10Q9HC96 672 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 PRMT8Q9NR22 394 aaPredicted RBP9.31□□□□□ -0.92
SKA1-201ENST00000285116 STARD5Q9NSY2 213 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 FBXO4Q9UKT5 387 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 IGLV1-36A0A0B4J1U3 117 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 A0A1W2PPC1 479 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 UTS2O95399 124 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 HLA-AP01891 365 aaKnown RBP9.31□□□□□ -0.92
SKA1-201ENST00000285116 NFYBP25208 207 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 CCR5P51681 352 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 SLC37A1P57057 533 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 COL19A1Q14993 1142 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 SGCBQ16585 318 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 TMEM225Q6GV28 225 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 SLC18B1Q6NT16 456 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 RBMS3Q6XE24 437 aaKnown RBP9.31□□□□□ -0.92
SKA1-201ENST00000285116 DPY19L4Q7Z388 723 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 BAP18Q8IXM2 172 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 SLC22A18ASQ8N1D0 253 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 OR51A4Q8NGJ6 313 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 TAAR8Q969N4 342 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 KTI12Q96EK9 354 aaPredicted RBP9.31□□□□□ -0.92
SKA1-201ENST00000285116 SRA1Q9HD15 236 aaKnown RBP9.31□□□□□ -0.92
SKA1-201ENST00000285116 SMCO4Q9NRQ5 59 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 ZNF346Q9UL40 294 aaKnown RBP9.31□□□□□ -0.92
SKA1-201ENST00000285116 MMACHCQ9Y4U1 282 aa9.31□□□□□ -0.92
SKA1-201ENST00000285116 CCSO14618 274 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 IGLV3-19P01714 112 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 PGDP52209 483 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 DCAF7P61962 342 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 PPP1CAP62136 330 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 NR0B2Q15466 257 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 EIF2S3LQ2VIR3 472 aaKnown RBP9.3□□□□□ -0.92
SKA1-201ENST00000285116 FAHD2BQ6P2I3 314 aaPredicted RBP9.3□□□□□ -0.92
SKA1-201ENST00000285116 TMPRSS9Q7Z410 1059 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 FAM160A2Q8N612 972 aaPredicted RBP9.3□□□□□ -0.92
SKA1-201ENST00000285116 C15orf54Q8N8G6 183 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms