RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 RNF212BA8MTL3 300 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 PPIHO43447 177 aaKnown RBP12.25□□□□□ -0.45
HMGN3-201ENST00000275036 ADH4P08319 380 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 SRD5A1P18405 259 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 RBMXP38159 391 aaKnown RBP12.25□□□□□ -0.45
HMGN3-201ENST00000275036 TEKQ02763 1124 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 COX10Q12887 443 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 MICAQ29983 383 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 FAM98BQ52LJ0 330 aaKnown RBP12.25□□□□□ -0.45
HMGN3-201ENST00000275036 PGM2L1Q6PCE3 622 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 ARL9Q6T311 187 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 CFAP77Q6ZQR2 320 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 Q6ZR03 302 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 LINC01356Q8N9X3 169 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 OR52L1Q8NGH7 329 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 SLC7A6OSQ96CW6 309 aaPredicted RBP12.25□□□□□ -0.45
HMGN3-201ENST00000275036 REEP1Q9H902 201 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 SAP30LQ9HAJ7 183 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 DECR2Q9NUI1 292 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 MRPL22Q9NWU5 206 aaKnown RBP12.25□□□□□ -0.45
HMGN3-201ENST00000275036 ATPIF1Q9UII2 106 aa12.25□□□□□ -0.45
HMGN3-201ENST00000275036 SAMHD1Q9Y3Z3 626 aaKnown RBP12.25□□□□□ -0.45
HMGN3-201ENST00000275036 ANK2Q01484 3957 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 IGHV1-69-2A0A0G2JMI3 117 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 PLSCR5A0PG75 271 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 TPD52L2O43399 206 aaKnown RBP12.24□□□□□ -0.45
HMGN3-201ENST00000275036 SOX14O95416 240 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 MT-ND5P03915 603 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 RAP2AP10114 183 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 PSKH1P11801 424 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 PYCR1P32322 319 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 GGT2P36268 569 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 LMO4P61968 165 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 TRAP1Q12931 704 aaKnown RBP12.24□□□□□ -0.45
HMGN3-201ENST00000275036 KRTAP24-1Q3LI83 254 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 FAM209AQ5JX71 171 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 AVPI1Q5T686 147 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 SLC18B1Q6NT16 456 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 RPL13AP3Q6NVV1 102 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 LYPD4Q6UWN0 246 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 TMEM179BQ7Z7N9 219 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 GJC3Q8NFK1 279 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 OR4Q3Q8NH05 313 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 CANT1Q8WVQ1 401 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 CMBLQ96DG6 245 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 LRGUKQ96M69 825 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 COQ7Q99807 217 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 NIPSNAP1Q9BPW8 284 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 CHID1Q9BWS9 393 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 DGCR6LQ9BY27 220 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 TBC1D23Q9NUY8 699 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 TREM2Q9NZC2 230 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 CYB5R1Q9UHQ9 305 aa12.24□□□□□ -0.45
HMGN3-201ENST00000275036 PURGQ9UJV8 347 aaKnown RBP12.24□□□□□ -0.45
HMGN3-201ENST00000275036 TIMM8AO60220 97 aaPredicted RBP12.23□□□□□ -0.45
HMGN3-201ENST00000275036 GSTM3P21266 225 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 KITLGP21583 273 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 RPS27P42677 84 aaKnown RBP12.23□□□□□ -0.45
HMGN3-201ENST00000275036 MVKQ03426 396 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 HLXQ14774 488 aaPredicted RBP12.23□□□□□ -0.45
HMGN3-201ENST00000275036 KRTAP27-1Q3LI81 207 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 LNX2Q8N448 690 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 SLC37A3Q8NCC5 494 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 OR10G2Q8NGC3 310 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 OR9Q1Q8NGQ5 310 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 HAVCR1Q96D42 359 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 MAP6Q96JE9 813 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 TSSK6Q9BXA6 273 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 HDHD2Q9H0R4 259 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 LPAR2Q9HBW0 351 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 PNRC2Q9NPJ4 139 aaKnown RBP12.23□□□□□ -0.45
HMGN3-201ENST00000275036 CYSLTR2Q9NS75 346 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 ARMC1Q9NVT9 282 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 CGGBP1Q9UFW8 167 aaPredicted RBP12.23□□□□□ -0.45
HMGN3-201ENST00000275036 DOCK11Q5JSL3 2073 aa12.23□□□□□ -0.45
HMGN3-201ENST00000275036 TVP23AA6NH52 213 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 AQP12BA6NM10 295 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 CST1P01037 141 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 HLA-DQA2P01906 255 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 CD55P08174 381 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 TUBG1P23258 451 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 THBS2P35442 1172 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 LIPAP38571 399 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 CDK5R2Q13319 367 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 CRMP1Q14194 572 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 AQP12AQ8IXF9 295 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 OR51L1Q8NGJ5 315 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 OR10S1Q8NGN2 331 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 PTP4A1Q93096 173 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 ELMOD3Q96FG2 381 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 DCLRE1CQ96SD1 692 aaKnown RBP12.22□□□□□ -0.45
HMGN3-201ENST00000275036 RBM4Q9BWF3 364 aaKnown RBP12.22□□□□□ -0.45
HMGN3-201ENST00000275036 NMNAT2Q9BZQ4 307 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 TUBG2Q9NRH3 451 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 DCAF16Q9NXF7 216 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 PTTG3PQ9NZH4 202 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 TMEFF2Q9UIK5 374 aaPredicted RBP12.22□□□□□ -0.45
HMGN3-201ENST00000275036 ZDHHC8Q9ULC8 765 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 WIPI2Q9Y4P8 454 aa12.22□□□□□ -0.45
HMGN3-201ENST00000275036 DHRS12A0PJE2 317 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms