RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 GMNNO75496 209 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 VENTXO95231 258 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 SEMG1P04279 462 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 KITLGP21583 273 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 RPS6KA3P51812 740 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 TNFAIP6P98066 277 aaPredicted RBP8.22□□□□□ -1.09
VPS41-201ENST00000265745 HNRNPA0Q13151 305 aaKnown RBP8.22□□□□□ -1.09
VPS41-201ENST00000265745 KRT72Q14CN4 511 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 CCDC92Q53HC0 331 aaPredicted RBP8.22□□□□□ -1.09
VPS41-201ENST00000265745 SHQ1Q6PI26 577 aaKnown RBP8.22□□□□□ -1.09
VPS41-201ENST00000265745 Q6ZR03 302 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 ADCK1Q86TW2 530 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 TEX29Q8N6K0 151 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 RNF148Q8N7C7 305 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 NPEPL1Q8NDH3 523 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 OR4M2Q8NGB6 313 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 OR1F12Q8NHA8 337 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 ZFAND2BQ8WV99 257 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 SLC7A6Q92536 515 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 PTP4A1Q93096 173 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 CMBLQ96DG6 245 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 PYURFQ96I23 114 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 SAMD8Q96LT4 415 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 GAL3ST1Q99999 423 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 TMPRSS13Q9BYE2 586 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 RERGLQ9H628 205 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 DCAF16Q9NXF7 216 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 AURKCQ9UQB9 309 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 J3QLI3 93 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 DCTN6O00399 190 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 ARPC3O15145 178 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 ATP8B1O43520 1251 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 DBHP09172 617 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 HSD17B1P14061 328 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 RAC2P15153 192 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 GATA3P23771 443 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 CRABP1P29762 137 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 GYS2P54840 703 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 SMIM11AP58511 58 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 HIST1H3AP68431 136 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 SCGB2A2Q13296 93 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 RSPO1Q2MKA7 263 aaPredicted RBP8.21□□□□□ -1.1
VPS41-201ENST00000265745 RFX4Q33E94 735 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 HIST2H3PS2Q5TEC6 136 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 SMARCD3Q6STE5 483 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 C8orf86Q6ZUL3 223 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 USP43Q70EL4 1123 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 HIST2H3AQ71DI3 136 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 NLRC3Q7RTR2 1065 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 PEG10Q86TG7 708 aaKnown RBP8.21□□□□□ -1.1
VPS41-201ENST00000265745 SEMA6DQ8NFY4 1073 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 OR2Z1Q8NG97 314 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 COG8Q96MW5 612 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 TSSK2Q96PF2 358 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 ERMAPQ96PL5 475 aaPredicted RBP8.21□□□□□ -1.1
VPS41-201ENST00000265745 FAM107BQ9H098 131 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 KRCC1Q9NPI7 259 aaPredicted RBP8.21□□□□□ -1.1
VPS41-201ENST00000265745 TMEM106BQ9NUM4 274 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 UBAP1Q9NZ09 502 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 CD300AQ9UGN4 299 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 IL19Q9UHD0 177 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 OPN4Q9UHM6 478 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 ATPIF1Q9UII2 106 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 B9D1Q9UPM9 204 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 NPTNQ9Y639 398 aa8.21□□□□□ -1.1
VPS41-201ENST00000265745 PPIAL4EA0A075B759 164 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 IGLV1-36A0A0B4J1U3 117 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 PPIAL4CA0A0B4J2A2 164 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 ISPDA4D126 451 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 PPIAL4DF5H284 164 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 GPANK1O95872 356 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 IGHV2-70P01814 119 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 SBK2P0C263 348 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 PPIAL4FP0DN26 164 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 TNFRSF1AP19438 455 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 TNFSF4P23510 183 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 FPR3P25089 353 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 ZFP36P26651 326 aaKnown RBP8.2□□□□□ -1.1
VPS41-201ENST00000265745 MSX2P35548 267 aaPredicted RBP8.2□□□□□ -1.1
VPS41-201ENST00000265745 RBMXP38159 391 aaKnown RBP8.2□□□□□ -1.1
VPS41-201ENST00000265745 RGS6P49758 472 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 ERFP50548 548 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 HLXQ14774 488 aaPredicted RBP8.2□□□□□ -1.1
VPS41-201ENST00000265745 MEP1BQ16820 701 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 SAMD4BQ5PRF9 694 aaKnown RBP8.2□□□□□ -1.1
VPS41-201ENST00000265745 DCAF12L2Q5VW00 463 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 C1orf94Q6P1W5 598 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 FBXW12Q6X9E4 464 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 ZNF771Q7L3S4 317 aaPredicted RBP8.2□□□□□ -1.1
VPS41-201ENST00000265745 C1QL2Q7Z5L3 287 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 LRRC28Q86X40 367 aaPredicted RBP8.2□□□□□ -1.1
VPS41-201ENST00000265745 PGAM4Q8N0Y7 254 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 OR6V1Q8N148 313 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 ZNF283Q8N7M2 679 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.2□□□□□ -1.1
VPS41-201ENST00000265745 GJC3Q8NFK1 279 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 OR5L1Q8NGL2 311 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 ZNF418Q8TF45 676 aaPredicted RBP8.2□□□□□ -1.1
VPS41-201ENST00000265745 DCLRE1CQ96SD1 692 aaKnown RBP8.2□□□□□ -1.1
VPS41-201ENST00000265745 CDRT15Q96T59 188 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms