RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 GLO1Q04760 184 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 KIR2DS5Q14953 304 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 C9orf50Q5SZB4 431 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 TMPRSS9Q7Z410 1059 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 ZNF248Q8NDW4 579 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 OR10R2Q8NGX6 335 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 PTPMT1Q8WUK0 201 aaPredicted RBP11.11□□□□□ -0.63
CHMP3-201ENST00000263856 TMEM41AQ96HV5 264 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 PTGES2Q9H7Z7 377 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 CNTD2Q9H8S5 307 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 SEC61A2Q9H9S3 476 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 MED9Q9NWA0 146 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 GSKIPQ9P0R6 139 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 GMEB2Q9UKD1 530 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 TNFSF18Q9UNG2 199 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 CSAG2Q9Y5P2 127 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 NUP210LQ5VU65 1888 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 TRAV36DV7A0A075B6V5 113 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 RNF222A6NCQ9 220 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 TNFRSF10CO14798 259 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 HTR3BO95264 441 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 AHSA1O95433 338 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 PVALBP20472 110 aaPredicted RBP11.11□□□□□ -0.63
CHMP3-201ENST00000263856 CSRP1P21291 193 aaKnown RBP11.11□□□□□ -0.63
CHMP3-201ENST00000263856 SLC37A1P57057 533 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 NSDHLQ15738 373 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 MPPED2Q15777 294 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 AWAT2Q6E213 333 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 OR52N4Q8NGI2 321 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 GPBAR1Q8TDU6 330 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 LMX1AQ8TE12 382 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 NPRL2Q8WTW4 380 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 MAFIPQ8WZ33 124 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 PELOQ9BRX2 385 aaKnown RBP11.11□□□□□ -0.63
CHMP3-201ENST00000263856 TPSD1Q9BZJ3 242 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 FOXQ1Q9C009 403 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 IGHV5-51A0A0C4DH38 117 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 NPIPA5E9PKD4 350 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 NSA2O95478 260 aaKnown RBP11.1□□□□□ -0.63
CHMP3-201ENST00000263856 IL33O95760 270 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 BGLAPP02818 100 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 RAB3AP20336 220 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 SERPINF1P36955 418 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 NPY4RP50391 375 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 POU3F1Q03052 451 aaPredicted RBP11.1□□□□□ -0.63
CHMP3-201ENST00000263856 AIMP2Q13155 320 aaKnown RBP11.1□□□□□ -0.63
CHMP3-201ENST00000263856 PRTGQ2VWP7 1150 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 EMC4Q5J8M3 183 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 ACOT7LQ6ZUV0 252 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 CCDC36Q8IYA8 594 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 KCNRGQ8N5I3 272 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 OR52N5Q8NH56 324 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 HOXB13Q92826 284 aaPredicted RBP11.1□□□□□ -0.63
CHMP3-201ENST00000263856 FOXRED1Q96CU9 486 aaPredicted RBP11.1□□□□□ -0.63
CHMP3-201ENST00000263856 HRH4Q9H3N8 390 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 BANF2Q9H503 90 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 NPIPA1Q9UND3 350 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 CPED1A4D0V7 1026 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 C5orf67F2Z3F1 127 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 S100A10P60903 97 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 SRSF3P84103 164 aaKnown RBP11.1□□□□□ -0.63
CHMP3-201ENST00000263856 CCINQ13939 588 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 OR5D18Q8NGL1 313 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 CHMP1AQ9HD42 196 aaPredicted RBP11.1□□□□□ -0.63
CHMP3-201ENST00000263856 PRMT8Q9NR22 394 aaPredicted RBP11.1□□□□□ -0.63
CHMP3-201ENST00000263856 OR6C76A6NM76 312 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 MPIG6BO95866 241 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 PGCP20142 388 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 RABIFP47224 123 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 PAN3Q58A45 887 aaKnown RBP11.1□□□□□ -0.63
CHMP3-201ENST00000263856 C1orf140Q5VVS0 124 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 CARD17Q5XLA6 110 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 RNF144BQ7Z419 303 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 LYG2Q86SG7 212 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 PUSL1Q8N0Z8 303 aaKnown RBP11.1□□□□□ -0.63
CHMP3-201ENST00000263856 OR2I1PQ8NGU4 316 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 NICN1Q9BSH3 213 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 MTIF3Q9H2K0 278 aaKnown RBP11.1□□□□□ -0.63
CHMP3-201ENST00000263856 GDF2Q9UK05 429 aaPredicted RBP11.1□□□□□ -0.63
CHMP3-201ENST00000263856 FAM96BQ9Y3D0 163 aa11.1□□□□□ -0.63
CHMP3-201ENST00000263856 C9orf170A2RU37 121 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 ADAP1O75689 374 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 ATG12O94817 140 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 OR2F2O95006 317 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 GP1BAP07359 652 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 GABRG2P18507 467 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 CALCRP30988 508 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 PPICP45877 212 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 HSD17B7P56937 341 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 OR2F1Q13607 317 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 DEFB133Q30KQ1 61 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 PLEKHN1Q494U1 663 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-201ENST00000263856 CATSPERDQ86XM0 798 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 OR10H5Q8NGA6 315 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 ASB17Q8WXJ9 295 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 GPER1Q99527 375 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 PRRT1Q99946 306 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 THADAQ6YHU6 1953 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 IGKV1D-43A0A0B4J1Z2 117 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 METTL12A8MUP2 240 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms