RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 BTG2P78543 158 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 EIF2B1Q14232 305 aaKnown RBP11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 RBM39Q14498 530 aaKnown RBP11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 ELAVL1Q15717 326 aaKnown RBP11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 GAB4Q2WGN9 574 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 BTNL8Q6UX41 500 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 NPSR1Q6W5P4 371 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 RBMS3Q6XE24 437 aaKnown RBP11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 KDM8Q8N371 416 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 CSNK1A1LQ8N752 337 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 TERB2Q8NHR7 220 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 TMEM41AQ96HV5 264 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 SPACA7Q96KW9 195 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 ZNF285Q96NJ3 590 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 TAAR9Q96RI9 348 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 ADAM19Q9H013 955 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 TAF9BQ9HBM6 251 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 RPH3AQ9Y2J0 694 aaPredicted RBP11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 PRSS38A1L453 326 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 BLACEA4D250 179 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 RAB27BO00194 218 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 SFT2D2O95562 160 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 PNPP00491 289 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 CSTBP04080 98 aaKnown RBP11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 ISG15P05161 165 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 SPARCP09486 303 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 STARD6P59095 220 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 SPOCK1Q08629 439 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 FABP9Q0Z7S8 132 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 SLC35D2Q76EJ3 337 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 FRMD1Q8N878 549 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 PHOSPHO1Q8TCT1 267 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 NKD1Q969G9 470 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 CLCC1Q96S66 551 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 TWSG1Q9GZX9 223 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 TMPRSS5Q9H3S3 457 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 RPS10P5Q9NQ39 176 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 OR2S2Q9NQN1 319 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 GDE1Q9NZC3 331 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 CACFD1Q9UGQ2 172 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 PCOLCE2Q9UKZ9 415 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 R4GMQ9 66 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 A0A1W2PP55 124 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 HIDE1A8MVS5 230 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 H0YIZ8 118 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 KCNAB3O43448 404 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 BPNT1O95861 308 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 IGFALSP35858 605 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 CCR4P51679 360 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 BIKQ13323 160 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 OR10G6Q8NH81 332 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 BAHD1Q8TBE0 780 aaPredicted RBP11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 METTL21AQ8WXB1 218 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 FAM3CQ92520 227 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 C2orf50Q96LR7 162 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 CCDC3Q9BQI4 270 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 SLC5A7Q9GZV3 580 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 PDE7BQ9NP56 450 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 UBQLN4Q9NRR5 601 aa11.11□□□□□ -0.63
CHMP2B-201ENST00000263780 MUC22E2RYF6 1773 aaPredicted RBP11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 A0A1W2PQU0 124 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 PRSS37A4D1T9 235 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 FOXS1O43638 330 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 LRP3O75074 770 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 FBP1P09467 338 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 CT45A8P0DMV1 189 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 CT45A9P0DMV2 189 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 CBR1P16152 277 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 CD80P33681 288 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 VIPR2P41587 438 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 HYAL4Q2M3T9 481 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 CT45A2Q5DJT8 189 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 SFTPA1Q8IWL2 248 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 ARRDC1Q8N5I2 433 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 OR4K15Q8NH41 348 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 MARCH1Q8TCQ1 289 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 DGAT2Q96PD7 388 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 OCSTAMPQ9BR26 566 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 FGF22Q9HCT0 170 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 DZANK1Q9NVP4 752 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 DTX4Q9Y2E6 619 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 C2orf74A8MZ97 194 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 SCDO00767 359 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 CST4P01036 141 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 IGHV2-70P01814 119 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 HOXC4P09017 264 aaPredicted RBP11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 PRF1P14222 555 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 HSD11B1P28845 292 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 LPAR6P43657 344 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 SLC6A8P48029 635 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 RAB5CP51148 216 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 EGR4Q05215 589 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 OR52W1Q6IF63 320 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 DHRS11Q6UWP2 260 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 ANGPTL5Q86XS5 388 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 GVQW1Q8N7I0 195 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 WDSUB1Q8N9V3 476 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 TRIM43Q96BQ3 446 aaPredicted RBP11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 C8orf44Q96CB5 159 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 KTI12Q96EK9 354 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms