RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 CCINQ13939 588 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 SERTAD2Q14140 314 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 RNASE10Q5GAN6 216 aaKnown RBP8.16□□□□□ -1.1
MSH4-201ENST00000263187 NAXEQ8NCW5 288 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 OR52H1Q8NGJ2 320 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 OR52N5Q8NH56 324 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 OR1L3Q8NH93 324 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 ADAT3Q96EY9 351 aaPredicted RBP8.16□□□□□ -1.1
MSH4-201ENST00000263187 S1PR5Q9H228 398 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 HHLA2Q9UM44 414 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 NPIPA1Q9UND3 350 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 POLR1DQ9Y2S0 133 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 HRH3Q9Y5N1 445 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 RFPL4AA6NLU0 287 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 HMSDA8MTL9 139 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 A8MXK9 166 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 RFPL4AL1F8VTS6 287 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 PLPP3O14495 311 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 ITGB2P05107 769 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 ERCC1P07992 297 aaPredicted RBP8.16□□□□□ -1.1
MSH4-201ENST00000263187 CSNK1EP49674 416 aaKnown RBP8.16□□□□□ -1.1
MSH4-201ENST00000263187 EPHA4P54764 986 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 ZNF273Q14593 569 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 SLC9A3R2Q15599 337 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 RAB30Q15771 203 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 GALNTL5Q7Z4T8 443 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 CATSPERDQ86XM0 798 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 ZNF248Q8NDW4 579 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 C15orf40Q8WUR7 153 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 CPNE2Q96FN4 548 aaPredicted RBP8.16□□□□□ -1.1
MSH4-201ENST00000263187 MRI1Q9BV20 369 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 TMPRSS13Q9BYE2 586 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 SLC7A5P2Q9GIP4 190 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 WWTR1Q9GZV5 400 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 TXNIPQ9H3M7 391 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 OR2S2Q9NQN1 319 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 ZNF275Q9NSD4 429 aaPredicted RBP8.16□□□□□ -1.1
MSH4-201ENST00000263187 MBD2Q9UBB5 411 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 SUSD2Q9UGT4 822 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 MMP17Q9ULZ9 603 aa8.16□□□□□ -1.1
MSH4-201ENST00000263187 TMEM265A0A087WTH1 108 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 A0A0B4J2A0 478 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 OR2AT4A6NND4 320 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 FADS1O60427 444 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 HTR3BO95264 441 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 NPY4RP50391 375 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 MC2RQ01718 297 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 SGCBQ16585 318 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 EMC4Q5J8M3 183 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 ADGRE4PQ86SQ3 457 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 LHFPL5Q8TAF8 219 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 OR51E1Q8TCB6 317 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 MARCH1Q8TCQ1 289 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 PAQR8Q8TEZ7 354 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 CCDC107Q8WV48 283 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 FAM71F1Q96KD3 344 aaPredicted RBP8.15□□□□□ -1.1
MSH4-201ENST00000263187 UTP23Q9BRU9 249 aaKnown RBP8.15□□□□□ -1.1
MSH4-201ENST00000263187 SAV1Q9H4B6 383 aaPredicted RBP8.15□□□□□ -1.1
MSH4-201ENST00000263187 IFT46Q9NQC8 304 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 COPS7AQ9UBW8 275 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 SHPKQ9UHJ6 478 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 ASPMQ8IZT6 3477 aa8.15□□□□□ -1.1
MSH4-201ENST00000263187 A0A1W2PPC4 97 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 CPED1A4D0V7 1026 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 FRG2CA6NGY1 282 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 MPTX1A8MV57 137 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 GPR31O00270 319 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 PMS2P2O95744 297 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 HPP00738 406 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 IGKV3-11P04433 115 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 FGF2P09038 288 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 ZNF735P0CB33 412 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 NAT1P18440 290 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 KLK2P20151 261 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 BLKP51451 505 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 MRPS21P82921 87 aaKnown RBP8.15□□□□□ -1.11
MSH4-201ENST00000263187 TLE3Q04726 772 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 MFAP5Q13361 173 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 SLC29A4Q7RTT9 530 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 OR2W3Q7Z3T1 314 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 ZNF519Q8TB69 540 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 MRPL38Q96DV4 380 aaKnown RBP8.15□□□□□ -1.11
MSH4-201ENST00000263187 TMEM41AQ96HV5 264 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 VN1R1Q9GZP7 353 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 TWSG1Q9GZX9 223 aa8.15□□□□□ -1.11
MSH4-201ENST00000263187 GDF2Q9UK05 429 aaPredicted RBP8.15□□□□□ -1.11
MSH4-201ENST00000263187 A0A1W2PNR3 127 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 OR6C65A6NJZ3 312 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 SDCBPO00560 298 aaPredicted RBP8.14□□□□□ -1.11
MSH4-201ENST00000263187 TOR1AO14656 332 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 SYT7O43581 403 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 ZNF205O95201 554 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 IFNA6P05013 189 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 GABRA4P48169 554 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 BIDP55957 195 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
MSH4-201ENST00000263187 UNC119Q13432 240 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 TEX30Q5JUR7 227 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 AWAT2Q6E213 333 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 ANGPTL5Q86XS5 388 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms